ggKbase | organisms

Consensus taxonomy: Gemmatimonadetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6

Properties

Avg. coverage: 1.00 Longest contig: 29.12 Kbp Bin length: 3.10 Mbp GC content: 65.71 %

Contigs count: 623 Features count: 3136 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38

Displaying items 51-100 of 623 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_12667_curated Species: R_Gemmatimonadetes_71_11 (50%)	2	2433 bp	63.79	1.00	90.88
scnpilot_solids1_trim150_scaffold_32779_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1232 bp	65.10	1.00	99.35
scnpilot_solids1_trim150_scaffold_28942_curated Species: Gemmatimonas aurantiaca (50%)	2	1044 bp	63.89	1.00	99.14
scnpilot_solids1_trim150_scaffold_14587_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2088 bp	66.14	1.00	88.51
scnpilot_solids1_trim150_scaffold_43427_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	776 bp	70.75	1.00	86.98
scnpilot_solids1_trim150_scaffold_20996_curated Species: Gemmatimonas aurantiaca (50%)	2	1697 bp	67.18	1.00	85.74
scnpilot_solids1_trim150_scaffold_8815_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2819 bp	66.48	1.00	90.03
scnpilot_solids1_trim150_scaffold_12503_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2401 bp	65.43	1.00	75.09
scnpilot_solids1_trim150_scaffold_6238_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	3883 bp	63.40	1.00	99.05
scnpilot_solids1_trim150_scaffold_18385_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1861 bp	66.04	1.00	93.01
scnpilot_solids1_trim150_scaffold_22830_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1601 bp	65.83	1.00	99.13
scnpilot_solids1_trim150_scaffold_18178_curated Species: Gemmatimonas aurantiaca (100%)	2	1824 bp	64.97	1.00	97.20
scnpilot_solids1_trim150_scaffold_15636_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2094 bp	67.91	1.00	97.85
scnpilot_solids1_trim150_scaffold_16571_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2007 bp	66.27	1.00	98.80
scnpilot_solids1_trim150_scaffold_32954_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1226 bp	65.01	1.00	96.41
scnpilot_solids1_trim150_scaffold_3511_curated Species: Desulfovibrio sp. U5L (50%)	2	6173 bp	67.67	1.00	98.95
scnpilot_solids1_trim150_scaffold_33233_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1196 bp	65.72	1.00	88.80
scnpilot_solids1_trim150_scaffold_15798_curated Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2006 bp	69.79	1.00	72.68
scnpilot_solids1_trim150_scaffold_11703_curated Species: Gemmatimonas aurantiaca (50%)	2	2578 bp	65.13	1.00	94.61
scnpilot_solids1_trim150_scaffold_25655_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1390 bp	66.76	1.00	77.48
scnpilot_solids1_trim150_scaffold_43582_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	979 bp	65.47	1.00	99.90
scnpilot_solids1_trim150_scaffold_14253_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2241 bp	65.91	1.00	95.98
scnpilot_solids1_trim150_scaffold_13161_curated Species: Gemmatimonas aurantiaca (50%)	2	2323 bp	66.94	1.00	98.54
scnpilot_solids1_trim150_scaffold_26289_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1287 bp	66.05	1.00	100.23
scnpilot_solids1_trim150_scaffold_32590_curated Species: Gemmatimonas aurantiaca (50%)	2	1199 bp	67.89	1.00	100.08
scnpilot_solids1_trim150_scaffold_10620_curated Species: Gemmatimonas aurantiaca (50%)	2	2408 bp	68.60	1.00	92.69
scnpilot_solids1_trim150_scaffold_27923_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1395 bp	67.74	1.00	89.89
scnpilot_solids1_trim150_scaffold_11263_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2645 bp	65.22	1.00	91.08
scnpilot_solids1_trim150_scaffold_17884_curated Species: R_Gemmatimonadetes_71_11 (50%)	2	1876 bp	65.94	1.00	90.83
scnpilot_solids1_trim150_scaffold_6564_curated Species: uncultured bacterium (50%)	2	3934 bp	63.17	1.00	91.97
scnpilot_solids1_trim150_scaffold_39094_curated Species: Gemmatimonas aurantiaca (50%)	2	1083 bp	66.85	1.00	94.46
scnpilot_solids1_trim150_scaffold_14000_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2268 bp	66.01	1.00	97.49
scnpilot_solids1_trim150_scaffold_12598_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2384 bp	67.83	1.00	86.33
scnpilot_solids1_trim150_scaffold_35245_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1169 bp	65.53	1.00	98.29
scnpilot_solids1_trim150_scaffold_16847_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1982 bp	65.84	1.00	99.29
scnpilot_solids1_trim150_scaffold_33439_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1214 bp	66.72	1.00	80.81
scnpilot_solids1_trim150_scaffold_6868_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	3802 bp	64.99	1.00	94.45
scnpilot_solids1_trim150_scaffold_39502_curated Species: Gemmatimonas aurantiaca (50%)	2	1074 bp	66.29	1.00	87.99
scnpilot_solids1_trim150_scaffold_7509_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	3561 bp	63.32	1.00	94.36
scnpilot_solids1_trim150_scaffold_12574_curated Species: Gemmatimonas aurantiaca (50%)	2	2183 bp	66.88	1.00	90.56
scnpilot_solids1_trim150_scaffold_9592_curated Species: Gemmatimonas aurantiaca (50%)	2	2920 bp	66.27	1.00	80.34
scnpilot_solids1_trim150_scaffold_36144_curated Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1084 bp	65.04	1.00	81.92
scnpilot_solids1_trim150_scaffold_14212_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2244 bp	63.81	1.00	82.49
scnpilot_solids1_trim150_scaffold_12735_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2315 bp	67.52	1.00	95.25
scnpilot_solids1_trim150_scaffold_34915_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1123 bp	62.60	1.00	86.02
scnpilot_solids1_trim150_scaffold_27730_curated Species: Cystobacter fuscus (50%)	2	1390 bp	64.03	1.00	97.34
scnpilot_solids1_trim150_scaffold_24188_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1535 bp	66.91	1.00	96.55
scnpilot_solids1_trim150_scaffold_19561_curated Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1785 bp	64.99	1.00	90.92
scnpilot_solids1_trim150_scaffold_39840_curated Species: Gemmatimonas aurantiaca (50%)	2	1067 bp	65.32	1.00	99.53
scnpilot_solids1_trim150_scaffold_26110_curated Species: Gemmatimonas aurantiaca (50%)	2	1414 bp	65.91	1.00	77.44

Displaying items 51-100 of 623 in total

solids_Gemmatimonadetes_1

SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Gemmatimonadetes_1

SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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