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scnpilot_solids1_trim150_scaffold_19102_curated_1

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(1..381)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] id=12494773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 252
  • Evalue 3.10e-64
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 127.0
  • Bit_score: 212
  • Evalue 1.10e-52
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 127.0
  • Bit_score: 236
  • Evalue 1.90e-59

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACCGACCGTTACGCCGTATTCGGGCACCCGATCGCCCACTCCAAATCTCCGCAGATCCATACTGCCTTCGCTCGCCAGACCGGCCAGGACATGCGCTACGAAGCCATCCTCGCACCGCTCGACGGCTTTGCGGCGAGCGTGGCGCAGTTCATCGCCGCAGGCGGGCGCGGCGCCAACGTCACCGTCCCGTTCAAGGAAGAAGCCTTCAAACTGGCCAGCCGCCTGAGCCCGCGCGCGCAACGCGCCGGGGCGGTCAACACGCTGGTGTTCGATGCCGACGGCATCCTCGGCGACAACACCGACGGCGCCGGCCTGGTCGCCGATCTCACCCGCAACCTGCGCTGCGCGCTCGCCGGCCAGCGCGTCCTGCTGCTCGGC
PROTEIN sequence
Length: 127
MTDRYAVFGHPIAHSKSPQIHTAFARQTGQDMRYEAILAPLDGFAASVAQFIAAGGRGANVTVPFKEEAFKLASRLSPRAQRAGAVNTLVFDADGILGDNTDGAGLVADLTRNLRCALAGQRVLLLG