ggKbase home page

scnpilot_solids1_trim150_scaffold_2601_curated_5

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(4977..6920)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase id=12498631 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 648.0
  • Bit_score: 1271
  • Evalue 0.0
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 638.0
  • Bit_score: 756
  • Evalue 8.00e-216
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain {ECO:0000313|EMBL:AAZ97364.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 638.0
  • Bit_score: 756
  • Evalue 3.60e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGTTTGATCGGAAGGCTGTCGCGTGGATCGTGCTGGGGCTGACAGTGATCCTGACTATCGGCTTATGGCGCTATTCCACGATGGAATTTGCGCGGCGTGCCAACGAAATTTTCAGGGACGCCACCGAAAAGCAGGCGGCGCATCTGCTGGACCGCATGCAGGATTACGAACAGGTTCTGCGGGGTGGCGCGGCACTCTTCGCCGCGAGCGATTCAGTCAGTCGCGAGGAATGGCACACCTATGTCGGGATGCTCAAACTGGATCATTCCCTGCCCGGCATTCAGGGCACCGGGTTTGCCTTGATGATTCCGGAAAGCGCCCGCCGCGCACATGAACACAGCGTGCGCCGCGAAGGATTTCCCGCTTACGCGATCCATCCGGCGGGCGATCGCGCCCTGTACAGCAGTATTGTGTATCTTGAGCCATTCAGCGGATCCAACCTGCGCGCATTCGGCTACGACATGTATTCAGATCCCGTTCGCCGCGAAGCGATGGAACGCGCACGCGATAGCGGCCAACCTGAAATGTCGGCAAAAATCACGCTTGTCCAGGAAGCGGGGCAGCGGAAACAGCCCGGTTTCCTGATCTATCTGCCGATCTATCGCAACGGCATGCCGCACGACACTGTGGCTGCACGGCGACGTGCGCTGTTCGGCTTCGTATACAGCCCGTTCCGGGTGGCCGACCTGATGAACAAGGTATTGAACGATCCCGGGCGAGAATTTGAAATCAGCTTGTTTGACGATCGGGCCACAGCGGACAACCTGCTGTTCTCTTCTGCCGGATCCGGACGCGCCTCGCGTTATGCGGCCGACCATGTCCTGTCGATCGGCGGCCGCCGCTGGATCGCCCGTTTCAAAAGCAATCCCGCTTTCGAAGCGAGAACGGAAAGTGCCCAGCCCCTCACGATTCTCTTTGGCGGTCTGCTGCTCAGCATGCTGTTCTTTTACGTCCTCTACATGAATGCGCGCCACCGGCGGGCGATGCACGATGTCGCGGAGAAACTCCAGGCCAGTCTCGACAACTTCAGAGCGCTCGTCGAAAATGTACCGGGCGCCGTGTTCCGGATTGAATTGGGGGCGTCCTCGCCGATGCAGCAGATCAGCCAGGGCATCCATGCGTTGACGGGCGAACCGCCTGAACGCTTTGTTTCCGGCGCGATTTCGTATGCCGGACTGATTCACCCTCACGATCGTTCCCTGGTAAGCAGGGCGATTACCCAGGCGATCGCCACACGTGGCGTCTACACGATCGAATACCGCATCAGAACCGTCGAGGAGCGCCTCCGCTGGGTCAGCGAACAAGGCCGCGTCACCTCCAACCAGACCGGTCATGCACAATGGCTGGATGGCCTCATCCTCGACATCAGCGAACGCAAGGCCGCCGAAATCATGATCCGCGATCTGGCCTACAACGACCCCTTGACTGAATTGCCCAACCGTCGCCTGTTGCTGGACCGCCTGAAGCATCAACTCGCGGCCAGTAGCCGCAGCGGCAGATACGGGGCGCTGTTGTTCATCGACATGGATCATTTCAAGGCCATCAATGACACTTTCGGCCACGAAGCGGGCGATCAGGTGCTCAAGGAAGTGGCCCGGCGTCTGCTCGCCAACGTCAGGGAGAGCGATACCGTTGCCCGCTTTGGCGGAGACGAATTCGTGGTCATCCTCGACAGCCTGGGCGACACGGCCGCCGCCGCTGCCGCGGAGGCGAATGAATTGGGCCACAAGATACTGGACAAACTTGCCCAGCCCTACCGGTTGGCTGGGGATTTCTGCACCAGTACGCCCAGCATAGGCATCGTCATCTTCTGCGGGCACGCGGCAAGCATGGATCAGTTGATCAAACGGGCCGACACGGCCATGTACGAGGCCAAATCGGCCGGGCGCAACCGGATAGCCTTCCATTCGGATCTGCCCACTACGGCGACCGGCGCAGAGTAG
PROTEIN sequence
Length: 648
MFDRKAVAWIVLGLTVILTIGLWRYSTMEFARRANEIFRDATEKQAAHLLDRMQDYEQVLRGGAALFAASDSVSREEWHTYVGMLKLDHSLPGIQGTGFALMIPESARRAHEHSVRREGFPAYAIHPAGDRALYSSIVYLEPFSGSNLRAFGYDMYSDPVRREAMERARDSGQPEMSAKITLVQEAGQRKQPGFLIYLPIYRNGMPHDTVAARRRALFGFVYSPFRVADLMNKVLNDPGREFEISLFDDRATADNLLFSSAGSGRASRYAADHVLSIGGRRWIARFKSNPAFEARTESAQPLTILFGGLLLSMLFFYVLYMNARHRRAMHDVAEKLQASLDNFRALVENVPGAVFRIELGASSPMQQISQGIHALTGEPPERFVSGAISYAGLIHPHDRSLVSRAITQAIATRGVYTIEYRIRTVEERLRWVSEQGRVTSNQTGHAQWLDGLILDISERKAAEIMIRDLAYNDPLTELPNRRLLLDRLKHQLAASSRSGRYGALLFIDMDHFKAINDTFGHEAGDQVLKEVARRLLANVRESDTVARFGGDEFVVILDSLGDTAAAAAAEANELGHKILDKLAQPYRLAGDFCTSTPSIGIVIFCGHAASMDQLIKRADTAMYEAKSAGRNRIAFHSDLPTTATGAE*