ggKbase home page

scnpilot_solids1_trim150_scaffold_2413_curated_14

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(10505..12214)

Top 3 Functional Annotations

Value Algorithm Source
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain id=12494872 bin=THIO_HI species=Chitiniphilus shinanonensis genus=Chitiniphilus taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 574.0
  • Bit_score: 1114
  • Evalue 0.0
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 582.0
  • Bit_score: 397
  • Evalue 6.40e-108
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AEV26100.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 582.0
  • Bit_score: 397
  • Evalue 2.90e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospira oryzae → Azospira → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1710
ATGGGCATGACGGTCATGGTGGTGGACGACACCGCCAACAATGTTGCAATCGCCGGCCAGGTGGTCAAAAGAATGGGACACCGCCTGATCGAGGCGCGTTCGGGAGAGGAAGCGCTGGAGAAGTTTCTCGCCGAGTCACCGGACATGATCCTGATGGATGTGATGATGCCCGGAATCGGCGGCCTGGAAGCGACGCGGCGCATCCGGCAGGCGGCGGGTTCGCGCTGGCTGCCGATCCTGATGGTCACCGCGCTCACGCGTGAGGACGAGGTTCTTGAAGGCTTGCGGGCGGGGGCGGACGACTATTTGACCAAGCCGCTGTCCTTTCCGGTGTTTCAGGCCAAAATCCAGGTGTTTCAGCGGATCGCCGAGCTGCAGCAGGCGCTTTCCCGGCACTCGGCGGAGCTTGCCGCCTACTACCGGCAGGCGGAAGACGAGCGGCGCCTCGGGGCACGGCTGATGGAATACATGGTCAACCGCGAAGGGCTCGATGACCCCACTTTGCGCTACCGCGTGACCCCCGCATGGCATTTCAGCGGCGATCTGATCGCCGCCGCGCGCACGCCCGGAAAATGCCACCATATCCTGCTCAGCGACGGCATGGGCCATGGCCTGCCGGCGGCGATGGCCTCGCTGCCGCAATTCGATACCTTTTACGCCATGACCGAGCTTGGCTACGGCATCGGACGCATCGCCGAGGTCATGAACAGCCGCATGCATACCATGATGCCGCCGGGACGCTATGCCGCCCTGACGCTCGTTTCGATCAATCCCGTGATAGGGACGATCGAGGTCTGGAACGGCGGCAATCCCTATCCCCGCCTGGTCGATGCCGACGGGGAAATCGTCAAGCACTGGAAATCCCAGCATGTGCCGCTTGGCCTTTTGTCGCCGGAAGAATTCTCCGCGGAACTCGAGGTGTATTCCTACGAAGGGGAATGCCAGTTGTTCCTGTGGACGGATGGCCTGACCGAGGCTGAAAATGCCGCAGGCGAGCAGTTTGGCGCCGAGCGTGCCTGCGCAACGCTGGAATCGACCGCGCCGGCGCATCGTTTCGAGGCGCTGTTGGCGGCGCTGGACGAGCATCGGGCGGGTGCGCTGATGGACGACATCAGCGTGCTGATGGTGGCAGTTCCCGCTCCGGGCACGCTGGAGCAGCCGGCTGCGCATACGGCCGCTGCGGAATACGGGAGCGACGGCCTGTGCATGTCGTTCCATTTCGAGGCGCAGGACCTGAAAAACCTGGATGTGGTGCCGACCCTGTCCGGCGTGATCGAGCGGATTGCGGCGATCAAAGAACATGCCGGCCAGATTTTCCTTATTCTGTCCGAACTGGTGTCCAATGCGCTGGATCATGGACTGTTGCGGATGGACTNNNNNNNNNNNNGTTTCGCCGCCTACGCGGCCCGGCGCCAGAACGCCTTGAAGGAACTGCAGCAGGGGTTCATCGACATCGGGATCGAAATCCTGCGGCGCGATAACCGCAAGATGGTGAAAATCTCCGTGCGTGACAGTGGTCCTGGATTCGACTGGGTAGTCCGGTCGAGCCTGTCGGAGAGCGGATTGCATGGGCGCGGCATCGAGCTGGTGCGGCGCTTGAGCCATGAAATGCGCTACAGCGGCGCCGGCAACGAGGTCGTCGTGTATTACGCGCTGAATCCATTTAACCACGCTATTGGCGGCAGCCGGAGTCATTCGCTGATGCAGTAA
PROTEIN sequence
Length: 570
MGMTVMVVDDTANNVAIAGQVVKRMGHRLIEARSGEEALEKFLAESPDMILMDVMMPGIGGLEATRRIRQAAGSRWLPILMVTALTREDEVLEGLRAGADDYLTKPLSFPVFQAKIQVFQRIAELQQALSRHSAELAAYYRQAEDERRLGARLMEYMVNREGLDDPTLRYRVTPAWHFSGDLIAAARTPGKCHHILLSDGMGHGLPAAMASLPQFDTFYAMTELGYGIGRIAEVMNSRMHTMMPPGRYAALTLVSINPVIGTIEVWNGGNPYPRLVDADGEIVKHWKSQHVPLGLLSPEEFSAELEVYSYEGECQLFLWTDGLTEAENAAGEQFGAERACATLESTAPAHRFEALLAALDEHRAGALMDDISVLMVAVPAPGTLEQPAAHTAAAEYGSDGLCMSFHFEAQDLKNLDVVPTLSGVIERIAAIKEHAGQIFLILSELVSNALDHGLLRMDXXXXXFAAYAARRQNALKELQQGFIDIGIEILRRDNRKMVKISVRDSGPGFDWVVRSSLSESGLHGRGIELVRRLSHEMRYSGAGNEVVVYYALNPFNHAIGGSRSHSLMQ*