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scnpilot_solids1_trim150_scaffold_10073_curated_3

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(1453..2187)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-); K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 245.0
  • Bit_score: 411
  • Evalue 1.40e-112
Pseudouridine synthase, Rsu id=1337017 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 245.0
  • Bit_score: 453
  • Evalue 1.30e-124
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 245.0
  • Bit_score: 453
  • Evalue 1.90e-124

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGCCGAGCCGGTTCGCCTGTCGAAACTGATGTCGGAACGCGGCCTGTGCTCGCGGCGCGAGGCCGACCGCTACATCGAACGCGGGCTGGTGTTCGTCGACGGCAGGCGGGTGAGCGAGCTGGGCACCAGGGTCGATCCGGATTGCGCGATACGGCTGGACGATACCGCCAGCGCACAGCAAGCACAGCGCGCCACCATCCTGCTACACAAGCCGGTCGGTTACGTGTCGGGTCAGCCCGAGCCGGGCTACCAGCCCGCCGTGACGCTGATCCGGCGCGATACCCAGTGGCAGGACGGACGGGCGAATCAGAGTTTCCACCCCACGCACCTCAAAGGCCTGGCGCCCGCCGGCCGGCTCGACATCGATTCCACCGGCCTCCTGGTGCTCACGCAGGACGGTCGCATCGCCAGACAGTTGATCGGCGATGATTCCGATATCGAGAAGGAATATCTGGTGCGGGTGAGCGGACGACTCGACGACAAGGGGCTCGCACTGCTCAACCACGGCCTCTCGCTCGACGGCTGCGCGCTGCGTCCCGCCCGGGTCGGCTGGCAGAATGCGGACCAGTTGCGCTTCATCCTGAAGGAAGGCCGCAAGCGCCAGATCCGCCGCATGTGCGAACTGGTTGGCCTGAAGGTAGTGGGCCTGAAGCGCGTACGGATCGGCCGGGTGCGCCTCGGTGATCTGCCATCGGGACAGTGGCGCTATCTGCGTCCGGACGAGCATTTTTAA
PROTEIN sequence
Length: 245
MAEPVRLSKLMSERGLCSRREADRYIERGLVFVDGRRVSELGTRVDPDCAIRLDDTASAQQAQRATILLHKPVGYVSGQPEPGYQPAVTLIRRDTQWQDGRANQSFHPTHLKGLAPAGRLDIDSTGLLVLTQDGRIARQLIGDDSDIEKEYLVRVSGRLDDKGLALLNHGLSLDGCALRPARVGWQNADQLRFILKEGRKRQIRRMCELVGLKVVGLKRVRIGRVRLGDLPSGQWRYLRPDEHF*