ggKbase home page

scnpilot_solids1_trim150_scaffold_1083_curated_15

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 13435..13905

Top 3 Functional Annotations

Value Algorithm Source
prepilin n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003785598 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 155.0
  • Bit_score: 124
  • Evalue 9.10e-26
Uncharacterized protein {ECO:0000313|EMBL:KFN51129.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 149.0
  • Bit_score: 141
  • Evalue 1.30e-30
pre-pilin leader sequence similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 144.0
  • Bit_score: 118
  • Evalue 2.10e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Arenimonas composti → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAAAACCCCCACCCAATTGAAATCTCTCCCCCGGCACATCCGCGGCATGAGCTTGATCGAAGTCCTCGTTGCCGTGGTGGTGCTGGCGGTGGGCATGCTGGGTGTGGCCTCCATGCAGGCATTGGCCCTGCGCGGTGGGCAAGGCTCATTGGAAAGCAGCCAAGCGGTGATGGCCGCAAACTCCATTATCGAGGCGATGCGCGCCAACCGGCTGAATGCGGCGACCTATGTCTTCAATGGCACCGCCGCTTGCGCAACGGTGCCTGCTGCTGGCGGCTCGCTCGCATCAAACGATCTCAATAACTGGGTGACGCAGCTCAAGGCCACCATCGGCACGGGCGCTGGCGACACCACCACCTGCGGCAGCATCACCCAGGCAGGTGGCGTGTATACCGTCACCGTCCAGTGGGATGACCGCCGCGCAGGGGGGGCTCAAACCCGGACGGTGGTGACGGAGGCGCGCATATGA
PROTEIN sequence
Length: 157
MKTPTQLKSLPRHIRGMSLIEVLVAVVVLAVGMLGVASMQALALRGGQGSLESSQAVMAANSIIEAMRANRLNAATYVFNGTAACATVPAAGGSLASNDLNNWVTQLKATIGTGAGDTTTCGSITQAGGVYTVTVQWDDRRAGGAQTRTVVTEARI*