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scnpilot_solids1_trim150_scaffold_14620_curated_7

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(4842..5771)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E8B567 similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 308.0
  • Bit_score: 442
  • Evalue 3.90e-121
Type II secretion system protein F {ECO:0000313|EMBL:EYR69116.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 308.0
  • Bit_score: 446
  • Evalue 2.20e-122
pilC; fimbrial assembly protein; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 308.0
  • Bit_score: 437
  • Evalue 3.00e-120

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
AACCCGGCCATGAAGAAGATGGTCAACACCCTGCGCGGCGACATCGAGGGCGGCGCCTCCATCTACGAAGCGATGAGCCAGTTCCCGGTCCAGTTCGACGAGCTGTACCGCAACCTGGTGCGCGCCGGCGAATCCTCCGGCGTGCTGGAAACCGTGCTGGAGACCATCGCCACCTACAAGGAAAACATCGAGAGCATCAAGGGCAAGATCAAGAAGGCGCTGTTCTACCCGGCCGCGGTAATCGCGGTGGCGATCCTGATCAGCGCCGTGTTGATGATCTACGTGGTGCCGATCTTCAAGGAGACCTTCTCCAGCTTCGGCGCCGACCTGCCCGCGTTCACCAACCTGGTGTTCGGCATCTCCGACATCGTGGTGAAGTGGTTCTGGCTGATCGGCATTGTCCTCGCCGCGGCGATCGGCTTCTTCATCTACACATACAAGCGTTCGCAGAAGCTGCAGCACACCGTTGACAGGCTGATGCTGAAGATCCCGGTGATCGGCAAAGTGCTGCACGAATCCGCCATTGCCCGCTTCGCCCGCACGCTGGCCCTGACCTTCCGCGCCGGCGTGCCGCTGGTGGAGGCGCTGGACAACGTGGCCGGCGCCACCGGCAGCATGGTCTACCACGATGCCGTGATGAAGATCAAAGACGACGTGGCCGTGGGTTACCCGGTCAACGTGGCGATGAAGCAGGTCAACCTGTTCCCGCACATGGTGGTGCAGATGACCGCCATCGGCGAGGAGGCCGGCGCGCTGGACACCATGCTGCTGAAGGTGGCCGAGTTCTACGAGGAAGAGGTCAGCAATACGGTCGATGCCCTGAGCAGCCTGATCGAGCCGATGGTGATGGTGATCATCGGCGGCCTGGTGGGCTCCATCGTGGTGGCCATGTACCTGCCGATCTTCAAGATCGCCATGACGGTGATGTAA
PROTEIN sequence
Length: 310
NPAMKKMVNTLRGDIEGGASIYEAMSQFPVQFDELYRNLVRAGESSGVLETVLETIATYKENIESIKGKIKKALFYPAAVIAVAILISAVLMIYVVPIFKETFSSFGADLPAFTNLVFGISDIVVKWFWLIGIVLAAAIGFFIYTYKRSQKLQHTVDRLMLKIPVIGKVLHESAIARFARTLALTFRAGVPLVEALDNVAGATGSMVYHDAVMKIKDDVAVGYPVNVAMKQVNLFPHMVVQMTAIGEEAGALDTMLLKVAEFYEEEVSNTVDALSSLIEPMVMVIIGGLVGSIVVAMYLPIFKIAMTVM*