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scnpilot_solids1_trim150_scaffold_13126_curated_3

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(1957..2283)

Top 3 Functional Annotations

Value Algorithm Source
ribosome hibernation promoting factor HPF n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EE5839 similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 95.0
  • Bit_score: 131
  • Evalue 5.20e-28
NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97307.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 106.0
  • Bit_score: 152
  • Evalue 3.10e-34
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 99.0
  • Bit_score: 128
  • Evalue 1.10e-27

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGCAGATCGAAACCTACGGCCAGCAGATGGACGTCACGCCCGCCCTGCGCAGCTACGTGGAGACCCGCTTCGAGCGGCTCGGCCGGCATTTCGAAGGCGACTGCGAGATCCGCGTCCAGCTCGGGCTGGAAAAGCCGGACCACAAGGCCGAGGCCAACGTCACCCTGGCCGGCCGCAAGCTGCACGCCGATGCCCTGGGCCAGGATATGTACGCGGCGATCGACCTGCTGGTGGACAAGCTGGACCGGCAGCTGATCAAGCACAAGGAAAAGCAGGTCGAGCAGCGCCGCGGCGAAGGGCTGGCACGGATGGGCACGGTCGACTGA
PROTEIN sequence
Length: 109
MQIETYGQQMDVTPALRSYVETRFERLGRHFEGDCEIRVQLGLEKPDHKAEANVTLAGRKLHADALGQDMYAAIDLLVDKLDRQLIKHKEKQVEQRRGEGLARMGTVD*