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scnpilot_solids1_trim150_scaffold_7829_curated_4

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 1368..2015

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 215.0
  • Bit_score: 363
  • Evalue 1.70e-97
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 210.0
  • Bit_score: 329
  • Evalue 1.10e-87
23S rRNA methyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000316E744 similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 214.0
  • Bit_score: 334
  • Evalue 8.00e-89

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCGACCCGCAGCAAATCCAGCCAGCGCTGGCTCAAGGAACACTTCTCCGACCCCTTCGTGAAGAAGGCGCAGGCCGAGGGCATGCGTTCGCGTGCCGCCTACAAGCTCGAGGAACTGGTCGAGCGCGACCGCCTGCTCAAGCCCGGCATGGTGGTGGTGGACCTCGGCGCGGCGCCAGGCGGCTGGTCGCAGTGGGTGCGCCAGGAGCTGGACCGGCTGGACGTGAACCGTCCCGGGCGGGTCATCGCCAGCGACATCCTGGAGATGCCCTCGCTGGCCGGGGTGGACTTCCTTCATGGCGATTTCAGGGAAGATGCGGTTCTATCGCAGCTGCTGCAGATGCTGAACGGTGAACAGGTCGACCTTGTCTTGTCCGACATGGCCCCCAATAAGAGCGGTATGACGGCGGTGGACCAGCCGCGCGCGATGCACCTGGCGGAACTGGCCATGGACTTCGCCGATGGCCAGCTCCGTACCGGCGGCACGTTCCTGATCAAGCTGTTCCAGGGAACGGGATTCGATGATTACGTGCGGGAACTGCGGCGGCGTTACGCCAAGGTGGTGATCCGCAAGCCGGCGGCCTCGCGCAACCGTTCGCCGGAGGTATACGCACTGGCCACCGGCAAGCTGGCACAGATCAAGTGA
PROTEIN sequence
Length: 216
MATRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELVERDRLLKPGMVVVDLGAAPGGWSQWVRQELDRLDVNRPGRVIASDILEMPSLAGVDFLHGDFREDAVLSQLLQMLNGEQVDLVLSDMAPNKSGMTAVDQPRAMHLAELAMDFADGQLRTGGTFLIKLFQGTGFDDYVRELRRRYAKVVIRKPAASRNRSPEVYALATGKLAQIK*