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scnpilot_solids1_trim150_scaffold_5283_curated_2

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 3109..3483

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 124.0
  • Bit_score: 245
  • Evalue 3.00e-62
30S ribosomal protein S12 id=2468511 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 125.0
  • Bit_score: 242
  • Evalue 2.40e-61
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 124.0
  • Bit_score: 236
  • Evalue 4.10e-60

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCAACGATCAACCAGCTGGTGCGCAAGCCGCGCAGCCCGGAAACCTACAAGAGCACCTCGCCCGCGCTGGCAAACTGCCCGCAGCGCCGCGGCGTGTGCACCCGCGTGTACACCACGACCCCGAAGAAGCCGAACTCGGCGTTGCGCAAGGTCGCCAAGGTGCGCCTGACCAACGGCTACGAGGTCATCTCGTACATCGGCGGCGAAGGCCACAACCTGCAGGAGCACAGCGTGGTGCTGATCCGCGGCGGCCGCGTCAAGGATCTGCCGGGCGTGCGCTACCACACCGTGCGCGGCTCGCTCGACGCCGCCGGCGTCGCCAAGCGCAAGCAGGCCCGCTCCAAGTACGGAGCCAAGCGTCCGAAGTCCTAA
PROTEIN sequence
Length: 125
MATINQLVRKPRSPETYKSTSPALANCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGYEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDAAGVAKRKQARSKYGAKRPKS*