ggKbase home page

scnpilot_solids1_trim150_scaffold_71_curated_2

Organism: solids_Microbacterium_1

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 303..2057

Top 3 Functional Annotations

Value Algorithm Source
Putative cell surface protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B756_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 561.0
  • Bit_score: 551
  • Evalue 8.60e-154
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94926.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 573.0
  • Bit_score: 693
  • Evalue 2.00e-196
wcoA; putative cell surface protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 561.0
  • Bit_score: 551
  • Evalue 2.70e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
GTGAGCGCGTTCGCGCTCGCACTGGCCGCACTGACGCTCGCACCTGACGCCGGGACCAGTGCTCCGGAGCCGATGCCCGCCTGGAACACCAGCGGGGTCCGCGCCGGGCGGGGCTCCGCGCCGGTCGGCACCGCTCGGTATGCCGTACCCGCGGGCGCGATCTACGTGGATGGCTCACATGGGTCGACTCACGCGACCGGGGCAGTCGGTGCACCGTTCGCGAGTGTTCAGAAGGCCATCGACAAAGCGTCCTCCGGCGGCACGGTCGTGCTGCGCGGCGGCACCTACAACCAGTCGCTCACGGTCCCCGCCGGGAAGCGTCTGACGATCCAGTCCTACCCCGGCGAGGCCGTCTGGTTCGACGGGTCCAAGCGGCTCACGAGCTGGCACCGGCTCGGGACGGCGTGGTATTCGACGGGATGGAACCATCACTTCGACTCGTCGCCGACCGACACCAAGGGTGCGCCGGATGGCACAAGCGCCGGATGGCAGTGGGTGAACCCTGCGAAGCCGATGGCGGCTCATCCCGAGCAGATCTGGATCGACGGCAGCCCGTTGCAGGAAGTGGGCAGCTTCGCGCAGGTCAAGCCGGGCACGTTCTTCGCAGACACAGCAGCCAAGCGGCTCTACATCGGGTCCAGTCCTGTCGGCCGAGAGGTCCGTGCCGCCGTCCTCACCAAGGCGATGTCACTGCGAGGCGACGGCGTGACCGTCCGAGGTATCGGCATCCGAAGATATGCGACCTCGGTCTGGATGATGGGTGCTGTGACGATCGAGGCCCCGAACGCCACGCTCGAGAACGTCGCCGTCTACGATTCCGCGACCACGGGCGTCTTCGTCGGAGCTGCGGATGCGACGTTGATGAACCTGACCGTGGCACGCAACGGTCTTCTCGGTGTGGGTGCCAACAATGCAGACAATCTGCGCGTGGGCGGTCTGCTGGTGGTGCAGAACAACAGTGAGGGCTTCAACAGGGCACCCGTCTCCGGCGGTCTGAAGATCACGAAGTCCCGCAGGCTCTCCGTGGCGGATTCCGCCTTCCTGGGTAACGACGGCCCTGGAATATGGGTGGATGAGTCGGTGTACGACATCGATATTCTGCGAAATGACATCCTGGGCAACACCGGTTCAGGGATACTTCTCGAACTGTCGCAGCGTGCCGATGTGATCGACAACCTCGTGCTCGACAGTGGGGGCAGCGGCGTGAAGATCAACAACACAGGCAGCGTCGAGTTGTGGAACAACACCATCGTGGGCGCCGATAGGCCGCTCAATATCGTGCAGGACGCTCGACGCGCCGATGATTCATCCGTGCCCGGCCACGACAAGCGCCGCCCGTTCCCCGACCCTGCCATGCCGTGGCTCGTGAACGGTGTGGGGGTGGGTAACAACGTCGTCGCGGCGTCGTCGGGCGACTGCACCTATTGCGTCGAAGACTACTCACTCCGTTTCACTGCCGCGCAGATGGGGATCTCGTCCAACGGCAATCTGCTGCAACGCGCTGCTGTTGATGCGCCGGCCTGGCTCGTCGTGTGGTCTCGGGGGGCGATCAATCGCAACCCCGCGGTCTATACGACGCTCGCGTCATACACGAATTCCACCGGACAGGATGCGTCCTCGCTGAGCGTCGACGGTCGTGCCGTAGTGGACTCGACCGGCCGGCTGCTGGCAGGGCTCGCGACGAGGCCCGTAAACCCGCCTGAAGCTGTCGCGGCGCTGGGCGCGGCGACGCGAGTCGGTGCGTCTTTCAGGTGA
PROTEIN sequence
Length: 585
VSAFALALAALTLAPDAGTSAPEPMPAWNTSGVRAGRGSAPVGTARYAVPAGAIYVDGSHGSTHATGAVGAPFASVQKAIDKASSGGTVVLRGGTYNQSLTVPAGKRLTIQSYPGEAVWFDGSKRLTSWHRLGTAWYSTGWNHHFDSSPTDTKGAPDGTSAGWQWVNPAKPMAAHPEQIWIDGSPLQEVGSFAQVKPGTFFADTAAKRLYIGSSPVGREVRAAVLTKAMSLRGDGVTVRGIGIRRYATSVWMMGAVTIEAPNATLENVAVYDSATTGVFVGAADATLMNLTVARNGLLGVGANNADNLRVGGLLVVQNNSEGFNRAPVSGGLKITKSRRLSVADSAFLGNDGPGIWVDESVYDIDILRNDILGNTGSGILLELSQRADVIDNLVLDSGGSGVKINNTGSVELWNNTIVGADRPLNIVQDARRADDSSVPGHDKRRPFPDPAMPWLVNGVGVGNNVVAASSGDCTYCVEDYSLRFTAAQMGISSNGNLLQRAAVDAPAWLVVWSRGAINRNPAVYTTLASYTNSTGQDASSLSVDGRAVVDSTGRLLAGLATRPVNPPEAVAALGAATRVGASFR*