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scnpilot_solids1_trim150_scaffold_40442_curated_1

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: comp(1..705)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 229.0
  • Bit_score: 384
  • Evalue 1.00e-103
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 229.0
  • Bit_score: 356
  • Evalue 5.20e-96
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E91E similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 235.0
  • Bit_score: 390
  • Evalue 1.30e-105

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Taxonomy

Microbacterium oleivorans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACGGCCGCGGAGGGAGTGCGCCTGCAGAAGGCGCTCGCCGGCGCGGGCGTCGCGTCGCGCCGGGGGTGCGAGCAGCTGATCGTGGAGGGCCGGGTGCGCGTGAACGGTGTCGTGGTCCGTGAGCTCGGCTCGCGCATCGATCCGGAGCGCGACCTCGTCGACGTCGACGGCACGGCGGTGCAGTTCGACCAGTCGATGCGGTACGTCCTGCTGAACAAGCCCACCGGCGTGGTCAGCTCGATGCACGACGACCGCGGCCGGCCCGACCTGCGCCGCTTCACCGGCGGGTGGCCGGAGCGCCTGTACAACGTCGGGCGGCTGGATGCCGAGACCAGCGGCCTGCTCGTGCTCACGAACGACGGCGAGCTTGCGCACGTGCTGGCCCATCCCTCGTTCGGAGTCACCAAGGTGTATGTCGCGAAGGTGCGCGGCGCCGTGACACCGCAGACCATCGCGCGCCTCACGCGTGGCGTGCAGCTGGAGGACGGGCCGATCGCCGCCGACAAGGCGCGGCTGCTGGACCGCTCGGGCTCCACGAGCCTCGTCGAGCTCACCCTGCACTCGGGCCGCAACCGCATCGTGCGCAGGATGATGGCGGAGGTGGGGCATCCCGTCGACGAGCTCGTGCGCCGCGGGTTCGGCCCGCTGCACCTGGGAACACTCCCGGTGGGCGCCACCCGCGAATTGACTAAAGTGGAACGC
PROTEIN sequence
Length: 235
MTAAEGVRLQKALAGAGVASRRGCEQLIVEGRVRVNGVVVRELGSRIDPERDLVDVDGTAVQFDQSMRYVLLNKPTGVVSSMHDDRGRPDLRRFTGGWPERLYNVGRLDAETSGLLVLTNDGELAHVLAHPSFGVTKVYVAKVRGAVTPQTIARLTRGVQLEDGPIAADKARLLDRSGSTSLVELTLHSGRNRIVRRMMAEVGHPVDELVRRGFGPLHLGTLPVGATRELTKVER