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scnpilot_solids1_trim150_scaffold_6514_curated_4

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: comp(3282..3791)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AC5CB similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 169.0
  • Bit_score: 255
  • Evalue 3.70e-65
Type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:CDK01030.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 169.0
  • Bit_score: 258
  • Evalue 8.10e-66
type II secretion system protein E; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 168.0
  • Bit_score: 209
  • Evalue 7.40e-52

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
CGCGACTACGAGACCGCCACGATCGCGATCGAGGCGGCGCTGACCGGGCACCTGCTGCTGTCGACGCTGCACACCAACGACGCGCCCAGCGCGATCACGCGCATGACAGAGATCGGCTGCGAGCCGTTCCTGGTCGCCACCGCGCTTCAGGCGGTGGTCGCACAACGGCCGGCACGCAAGCTCTGCACGCACTGCAAGGTCGCGTACACCGAGAACCCCGAGACGCTGCGGCAGCTGCAGTTCCCGCACGAGCACAGCGACCCCCCGCAGCTGTACCGCACCGGCGGCTGCCCGTCGTGCTCGGGCACCGGGTACCGCGGCCGGATCGCGCTGCACGAGGTGATGACGATGTCCGACGAGCTGGCGCAGCTGGTCACCACGCACGCGACCGGCACCCAGCTGCGCCAGACCGCGCTCGCGCAGGGCATGGTGGCGCTGCGCGACGACGGCTGGAGCAAGGTCACGCAGGGTCTGACCACCATTGAAGAGGTGCTGCGCGTCAGCGTGTGA
PROTEIN sequence
Length: 170
RDYETATIAIEAALTGHLLLSTLHTNDAPSAITRMTEIGCEPFLVATALQAVVAQRPARKLCTHCKVAYTENPETLRQLQFPHEHSDPPQLYRTGGCPSCSGTGYRGRIALHEVMTMSDELAQLVTTHATGTQLRQTALAQGMVALRDDGWSKVTQGLTTIEEVLRVSV*