ggKbase home page

scnpilot_solids1_trim150_scaffold_6954_curated_2

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: comp(445..825)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003683F77 similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 127.0
  • Bit_score: 207
  • Evalue 8.70e-51
Cold-shock protein {ECO:0000313|EMBL:KHK98614.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 1.10e-51
cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 127.0
  • Bit_score: 202
  • Evalue 6.70e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCCCACCGGCAAGGTCAGGTTCTACGACGACGAGAAGGGCTTCGGCTTCATCTCGTCCGACGACGGTCAGGATGTCTTCCTGCACGCCACGGCCCTGCCCGCGGGTGCCGAGGTGAAGACGGGCACCCGCGTCGAGTTCGGCCTGGCCGACGGCCGCCGTGGTCCTCAGGCGCTGTCGGTGCGCGTCCTGGAAGCGCCGGTGAGCCTCGTCAAGCGCGCGCGCAAGCCCGCCGACGACATGGCCGTCATCGTCGAAGACCTGGTGGGACTGCTCGACAAGATCGGCGGCGACCTGCGCCACGGGCGCTACCCGTCGCACGGTCAGTCGCGCAAGATCGCCGCGCTGCTGCGCAAGGTGGCCGATGACTTCGACGCCTGA
PROTEIN sequence
Length: 127
MPTGKVRFYDDEKGFGFISSDDGQDVFLHATALPAGAEVKTGTRVEFGLADGRRGPQALSVRVLEAPVSLVKRARKPADDMAVIVEDLVGLLDKIGGDLRHGRYPSHGQSRKIAALLRKVADDFDA*