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scnpilot_solids1_trim150_scaffold_1000_curated_9

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 8292..12521

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 999.99
  • Bit_score: 2722
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 999.99
  • Bit_score: 2722
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RPOC_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 999.99
  • Bit_score: 2722
  • Evalue 0.0

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4230
ATGAAAGCACTGCTTGATTTATTCAAACAGGTTACCCAGAAAGAAGAGTTCGATTCGATCAAGATCGGTCTGGCTTCTCCCGAGAAAATACGTTCCTGGTCCTACGGTGAGGTGAAGAAACCGGAAACCATCAATTATCGTACGTTCAAACCCGAGCGAGATGGCCTGTTCTGCGCAAAAATCTTTGGTCCGGTAAAGGATTACGAGTGCCTTTGCGGAAAGTACAAGCGTTTGAAACATCGCGGGGTGATCTGCGAGAAATGTGGTGTCGAGGTCACGTTATCCAAGGTGCGGCGCGAACGCATGGGCCATATCGAACTGGCATCCCCTGTGGCGCACATCTGGTTCCTGAAGTCACTGCCGTCCCGATTGGGGATGGTGCTGGATATGACTTTGCGCGACATAGAGCGGGTGCTCTATTTCGAGGCGTATGTCGTAACGGACCCGGGCCTGACGCCTCTCCAGCGATGCCAGTTGCTGACAGATGACGATTACCGGGCTAAAACCGAGGAATACGGGGATGATTTTCGCGCCAGTATGGGGGCGGAAGGTATTCGTGATCTATTGAATACCCTGAATATTCGTGTAGAAATCGATAATCTTCGCCGCGAAATGGGAACGACCGGCTCCGAAACGAAGATGAAGAAGATTTCGAAGCGTCTGAAAGTACTGGAGGCATTCAGCAAATCCGGCATCAAGCCGGAATGGATGATTCTGGCCGTGCTGCCGGTGCTGCCTCCCGAACTGCGGCCACTGGTGCCGCTGGATGGAGGACGTTTTGCGACTTCCGATCTCAATGACTTGTACCGTCGCGTCATTAACCGCAATAATCGGTTGAAACGTTTGCTCGAACTGAAGGCGCCGGAAATTATCGTGCGCAACGAGAAGCGCATGCTGCAGGAAGCGGTGGATTCACTGCTGGATAACGGCCGTCGCGGTAAAGCCATGACGGGTGCCAACAAACGCCCGCTGAAATCGCTTGCGGACATGATCAAGGGCAAGGGCGGGCGCTTCCGCCAGAACCTGCTTGGGAAACGCGTGGATTATTCCGGACGCTCGGTTATCGTGGTGGGGCCGCAGCTCAAGCTGCACCAGTGCGGTTTACCCAAGAAGATGGCGCTGGAGTTATTCAAACCCTTTATCTTCAACAAGCTGGAGATAATGGGTATCGCCAGCACGATAAAGGCTGCAAAACGCGAGGTCGAAAACGAAAGCCCGATCGTGTGGGACATCCTGGAAGATGTCATTCGTGAGCATCCTGTAATGCTGAACCGGGCGCCGACGTTGCATCGGCTGGGTATTCAGGCATTTGAGCCGGTCCTGATAGAAGGCAAGGCCATCCAATTGCATCCGTTGGTATGTGCCGCTTTCAACGCGGATTTTGACGGCGATCAGATGGCGGTCCACGTGCCGCTTTCGCTGGAAGCGCAAATGGAGTGCCGCACGCTGATGATGTCGACCAACAACGTCTTGTCGCCTGCCAACGGTGAACCCATTATCGTGCCGTCGCAGGACATCGTGCTGGGGCTGTACTCCACCACGCGCGAGAAGGTCAATGCGCGGGGTGAGGGTATGTATTTCGCCAATATCGGCGAAGTTTCGCGTGCCTACGAGAACCGCGTTATCGAGCTGAATGCCCGGATTTCAGTGAGGATCCCCGAATACGAGTTGGCCGCGGATGGAGAGCGGCGCGAGAAGATCACGCGATATGAAACCACGGTAGGACGTGCATTATTGTCAGAGATTCTCCCTGCCGGACTGCCTTTCCCGCTGATCAACAAGGTACTCAAGAAAAAAGAAATCTCCAAGCTCATCAATGCAAGCTTCCGCCGCTGCGGTCTGCGCGAAACCGTGATTTTCGCCGATAAGCTGATGTATGCCGGTTTCAGCTATGCGACGCGCGCCGGGATTTCGATCTGCCTGGACGATATGCTTACCCCGGCGCAGAAGGATGCAATCATCAGTGCCTCCGAGAAGGAAGTGCAGGAGATCGAGCTCCAGTATACGTCCGGTCTTGTCACCCAGGGTGAACGTTACAATAAGGTCGTGGACATATGGGGTCGCGCCGGCGACCAGGTTGCAAAGGCAATGATGGATCAGCTCGGGGTCGAGCCGATCATCGACCCGGAAACCGGAGTGGCCAAAACGGGTGAGTCAGGGAAGCCCCTGCTTCAGGAATCATTCAATTCCATCTATATGATGGCGGATTCGGGCGCCCGCGGTTCTGCTGCTCAGATCCGTCAACTGGCAGGAATGCGCGGTCTGATGGCCAAGCCGGATGGTTCCATCATCGAAACGCCCATCACGGCTAATTTCAGAGAAGGATTGAACGTCTTGCAGTACTTTATTTCCACGCACGGGGCGCGCAAGGGTCTGGCCGATACAGCGCTGAAGACGGCTAACTCAGGCTATCTTACCCGGCGGCTTGTCGATGTGACACAGGATCTGGTGGTAACCCAGGAGGACTGTGGCACCAGCAACGGCGTGGTGATGAAGGCATTGGTCGAAGGTGGTGAGGTCATCGAGGCGTTACGCGAACGTATCCTCGGTCGCGTAGTGGTCAATGATATTGTCAATCCGGAGCATCAGACCGTGATTTACCCGGCAGGCATGCTGCTGGATGAAAATGCAGTGGATGCCATTGAGATGCTGGGTATAGATGAAGTGAAGGTTCGCACTCCGCTTACCTGTGAAACACGCTATGGTCTGTGTGCCAAATGTTATGGACGCGATCTGGGACGCGGCACGCCGGTCAATGTCGGCGAGGCGGTGGGAGTGATCGCCGCTCAGTCGATCGGAGAGCCCGGCACTCAGCTGACCATGCGCACTTTCCATATCGGAGGAGCGGCTTCCCGAACAGCGGTCGCAAGCCAGGTCGAGAGCAAATCCAACGGTGTTGTGCGATATTCACCGAGCATGCGCTATGTGACCAATGCGCGTAACGAATTGATCGCGATTTCCCGTAGCGGCGAAGTGGTGATTCAGGATGACAACGGGCGTGAGCGGGAACGGCACAAGGCCCCGTACGGCGCGACCTTGCTGATTCGTGACGGAGAAGTCGTGAAAGCCGGACAGGTACTGGCTGCATGGGATCCGCACACGCGTCCAATCATTACTGAATACTCCGGCAAGGTCCGCTTCGAGAACGTGGAAGAGGGCGTGACCGTGGCCAAGCAGATAGATGAAGTAACCGGTTTGTCCACGCTGGTAGTGATCGATCCGAAGCGCCGTGGAGTAGTGCAGACGAAGGGATTACGCCCGATGGTGAAGCTCCTGGATGACGAGGGCAAGGAGGTGCGGCTGGCGGGCAGTAATTTGCCGGTTCACATTACCTTCCAGGTGGGTTCCATCATCACTGTTCGGGATGGGCAGCAGGTCAGCGTCGGTGAGGTTCTCGCGCGTATTCCACAGGAAAGCTCGAAAACGCGGGACATTACCGGTGGTTTGCCCCGCGTTGCGGAATTGTTTGAAGCACGTTCCCCAAAGGATGCGGGTGTGCTGGCGGAAGTCACCGGAATCGTATCCTTCGGCAAGGATACCAAGGGCAAGCAACGGCTGGTCATTACGGACCTGGATGGAGTGTCGCACGAGTATCTCATTCCCAAGGACAAGCACGTGACTGCCCACGATGGGCAGGTGGTGAACAAGGGGGAAAGTATCGTCGACGGCCCTGCCGATCCACACGATATTCTTCGTCTGCTGGGGGTGGAGGCGCTGGCGCGTTATATCACCGACGAGGTGCAGGACGTGTACCGCTTGCAGGGTGTCAAGATCAATGACAAGCACATCGAGGTGATAGTGCGCCAGATGCTGCGACGCGTGCAGATCGTGGATTCCGGCGATACGCGCTTCATTCCGGGTGAACAGGTTGAACGCGCCGAAATGCTTGCGGAAAACGAACAGGTTGAATTAGAGGGCAAGAGGCCGGCAACCTATGAGTATATGCTGCTGGGCATCACTAAAGCTTCGCTGTCCACCGACTCCTTCATTTCGGCAGCATCGTTCCAGGAGACTACGCGGGTGCTGACCGAAGCGGCTATCATGGGCAAGAAGGATGATCTGCGCGGGTTGAAAGAAAACGTTATTGTAGGCCGCCTTATTCCCGCAGGTACGGGTCTGACTTTCCATAATACCCGCAAGAGGCAGCGCCTCATGCTGGATACCGGCGAAACGCCTCCTTTGAGTGAGGAAGAGACAGGAGAAATTAGAAACAGTGGATATGCTGTCTGA
PROTEIN sequence
Length: 1410
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVTDPGLTPLQRCQLLTDDDYRAKTEEYGDDFRASMGAEGIRDLLNTLNIRVEIDNLRREMGTTGSETKMKKISKRLKVLEAFSKSGIKPEWMILAVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEIMGIASTIKAAKREVENESPIVWDILEDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMMSTNNVLSPANGEPIIVPSQDIVLGLYSTTREKVNARGEGMYFANIGEVSRAYENRVIELNARISVRIPEYELAADGERREKITRYETTVGRALLSEILPAGLPFPLINKVLKKKEISKLINASFRRCGLRETVIFADKLMYAGFSYATRAGISICLDDMLTPAQKDAIISASEKEVQEIELQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQLGVEPIIDPETGVAKTGESGKPLLQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTQEDCGTSNGVVMKALVEGGEVIEALRERILGRVVVNDIVNPEHQTVIYPAGMLLDENAVDAIEMLGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVASQVESKSNGVVRYSPSMRYVTNARNELIAISRSGEVVIQDDNGRERERHKAPYGATLLIRDGEVVKAGQVLAAWDPHTRPIITEYSGKVRFENVEEGVTVAKQIDEVTGLSTLVVIDPKRRGVVQTKGLRPMVKLLDDEGKEVRLAGSNLPVHITFQVGSIITVRDGQQVSVGEVLARIPQESSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGIVSFGKDTKGKQRLVITDLDGVSHEYLIPKDKHVTAHDGQVVNKGESIVDGPADPHDILRLLGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQIVDSGDTRFIPGEQVERAEMLAENEQVELEGKRPATYEYMLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLTFHNTRKRQRLMLDTGETPPLSEEETGEIRNSGYAV*