ggKbase home page

scnpilot_solids1_trim150_scaffold_8_curated_36

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 37957..38688

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 243.0
  • Bit_score: 429
  • Evalue 6.50e-118
Ribosomal large subunit pseudouridine synthase F {ECO:0000313|EMBL:ABB73571.1}; EC=5.4.99.- {ECO:0000313|EMBL:ABB73571.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 243.0
  • Bit_score: 429
  • Evalue 2.90e-117
Ribosomal large subunit pseudouridine synthase F n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCF0_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 243.0
  • Bit_score: 429
  • Evalue 2.10e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGGAAAAAATCCGGTTATCCAAGCTCATGGCCCAGAAGGGATTGTGTTCGCGCCGGGAAGCGGATGACTATATCGAACGCGGTTGGGTATTCGTGGATGGCGAGCGCATCAATCAACTAGGCATCAAGGTTTTTCCCACGCAGGAAATAAAGCTTGCGCGTATGGCGCAGGCGCAGCAGTGCGGTCAAATCACCGTACTGTTGCATAAGCCAGTCGGATATGTTTCAGGACAACCCGAGCGGGGATACAAGCCTGCGATCAGCCTCATCAACAGAGAATCACAGCTTCAAGATAGCAATGCACCCTCCAGTTTTAGCCCATCAAATTTGAGAGGCATGGCGCCGGCAGGTCGGTTGGATATCGATTCAAGCGGATTGCTTGTGTTTACCCAGGATGGCCGCATCGCGAGGAAATTGATCGGTGCCGAATTCGGGATTGAAAAGGAGTATCTTGTACGTGTGGAAGGAGTGTTGTCCCAGCGCATCCTGGATCTGCTGAGTCACGGCTTGAGCCTGGATGGAAAGGTACTGAAACGTGCCGAGGTGGTGCAGCAGAATAAGGACCAATTGAGGTTCATTTTGAAGGAAGGCAGGAAGCGGCAGATTCGTAGAATGTGCGAACTGGCTGGTTTGAACGTCACAGGACTCAAACGAATTCGCATCGGCAAGGTAAGGCTTGGCGAACTTCCCGTGGGAAAATGGCGTTATTTGCGGCAAAACGAAGAGTTTTAA
PROTEIN sequence
Length: 244
MEKIRLSKLMAQKGLCSRREADDYIERGWVFVDGERINQLGIKVFPTQEIKLARMAQAQQCGQITVLLHKPVGYVSGQPERGYKPAISLINRESQLQDSNAPSSFSPSNLRGMAPAGRLDIDSSGLLVFTQDGRIARKLIGAEFGIEKEYLVRVEGVLSQRILDLLSHGLSLDGKVLKRAEVVQQNKDQLRFILKEGRKRQIRRMCELAGLNVTGLKRIRIGKVRLGELPVGKWRYLRQNEEF*