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scnpilot_solids1_trim150_scaffold_28_curated_130

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(161446..162774)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Variovorax sp. CF313 RepID=J2KDH1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 456.0
  • Bit_score: 473
  • Evalue 2.30e-130
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 453.0
  • Bit_score: 473
  • Evalue 7.10e-131
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADU39710.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 453.0
  • Bit_score: 473
  • Evalue 3.20e-130

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGCCCGCATCCTGATTATCGACGACGATGCCAGTTTTCGCGAAAGTCTTGCGGAGACCTTGTCAGGCATGGGCCACGAATTATCCCTGGCTGCTGACGGAGCGCGTGGACTCTCGTTCCTGAAGCGTGGCGGTATCGACGCTGTTTTTCTCGACTTTCGTCTGCCTGATATGACAGGCATGGATGTCCTGCGCGCCATCAAGCGGCTGCCCGGCGATATGCCCCCGGTTGTCATGCTAACCGCCTATACCAGCGTCGATAATACGATAGAGGCGATGAAGCTCGGCGCCTTTGAGCATCTTGCCAAGCCCGTTGGCCGTCAGGCAGTTGAAAATACGCTTGGAGCAGCTTTGGCTTCAAGCAGCAGGACAACACGGCAAAATCCGGTTCCTGGCGAAGGCGAGTTTGTTGCGCGCAGCGAGCGGATGCGGGAAACCCTCAAGTTGATCGGGCGTGCGGCAGCAAGCGAGGCCACGGTACTCATTACCGGCGAAACCGGAAGCGGTAAAGAAATAGTCGCGCGTGCTCTTCATCAGCATAGCACTCGGGCATCGCATCCTTTTGTCGCCATCAATTGTGTGGCAATTCCCCACGAACTACTGGAAAGTGAGCTGTTCGGTCATGTCAGGGGGGCTTTTACCGGCGCTGCTGCAGCTCACGCTGGCATCTTCGCTCAGGCGGAGGGCGGCACCTTGCTGCTCGATGAAATCGGTGATATGAGCGTCAACCTGCAAGCCAAGCTCCTGCGGGTGCTCGCGGAAGGAGTAATCATACCCCTGGGCGCGGAGCATACGCAGGCAGTAAATGTCCACCTGCTCGCTGCCACCCACCGTGATCTTGGGCAGCAGGTTGCGGAAGGCAAGTTCCGCGAAGACCTGTTTTATCGGCTCAATGTCATCAATATTCATGTGCCGCCATTGCGTGAACGGCGCGAGGATATCATTCCGCTGGCCGAGCATTTTCTTGCCATGGCAAGCGATACGCCCAAAGCGCTCTCGGCAGAGGCTCGGCAATATCTTGAGATGCACTCATGGCCAGGCAATGTGCGGGAACTCCGAAATGTAATTGAACGGGCAATGATTCTTGCCCGCGGCGCTTCGATCGAAGCGGGAGACCTTGGCTTGGGTAAAATTCCTGCTCCTCTCGCATTACCGGCAGGAGTTCCGCTTATGAGTGACCTTCCCAAAGCGCTGGCCCAGCTTGAAGAGGTGATGATTCGCGCGGCGATTGCCGAAACCGGCGGCAATCGCGCGGAGGCGGCGAGACGGCTGGGCATCCGACGTCAATTGCTCTACGCGAAACTGCGGCAGTACGGGATCGAGCCTTAA
PROTEIN sequence
Length: 443
MARILIIDDDASFRESLAETLSGMGHELSLAADGARGLSFLKRGGIDAVFLDFRLPDMTGMDVLRAIKRLPGDMPPVVMLTAYTSVDNTIEAMKLGAFEHLAKPVGRQAVENTLGAALASSSRTTRQNPVPGEGEFVARSERMRETLKLIGRAAASEATVLITGETGSGKEIVARALHQHSTRASHPFVAINCVAIPHELLESELFGHVRGAFTGAAAAHAGIFAQAEGGTLLLDEIGDMSVNLQAKLLRVLAEGVIIPLGAEHTQAVNVHLLAATHRDLGQQVAEGKFREDLFYRLNVINIHVPPLRERREDIIPLAEHFLAMASDTPKALSAEARQYLEMHSWPGNVRELRNVIERAMILARGASIEAGDLGLGKIPAPLALPAGVPLMSDLPKALAQLEEVMIRAAIAETGGNRAEAARRLGIRRQLLYAKLRQYGIEP*