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scnpilot_solids1_trim150_scaffold_195_curated

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_195_curated_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41770..42393
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR16_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89657.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_195_curated_32
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42543..44096
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030BE211
Peptidase S10 {ECO:0000313|EMBL:AIF46555.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids1_trim150_scaffold_195_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44126..45814
DNA (1689bp) protein (563aa)
acid phosphatase (EC:3.1.3.2)
Acid phosphatase {ECO:0000313|EMBL:AGG90634.1}; EC=3.1.3.2 {ECO:0000313|EMBL:AGG90634.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acid phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA9_9GAMM
scnpilot_solids1_trim150_scaffold_195_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45830..46258
DNA (429bp) protein (143aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=I4WJZ2_9GAMM
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AGG90639.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_195_curated_35
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46283..47746
DNA (1464bp) protein (488aa)
Aminopeptidase N n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR0_9GAMM
Aminopeptidase {ECO:0000313|EMBL:GAN45090.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_195_curated_36
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47821..48804
DNA (984bp) protein (328aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR63_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL89704.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_195_curated_37
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48926..49534
DNA (609bp) protein (203aa)
Putative Fa2h protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR64_9GAMM
Putative Fa2h protein {ECO:0000313|EMBL:EIL89705.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sterol desaturase
scnpilot_solids1_trim150_scaffold_195_curated_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49598..50368)
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W763_9GAMM
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EIL95304.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_195_curated_39
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50515..51432)
DNA (918bp) protein (306aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU7_9GAMM
DNA recombination-dependent growth factor C
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_195_curated_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51532..52734)
DNA (1203bp) protein (401aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:EIL95312.1}; EC=2.6.1.57 {ECO:0000313|EMBL:EIL95312.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Aromatic amino acid aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W771_9GAMM
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids1_trim150_scaffold_195_curated_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52874..53080
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W773_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95314.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized conserved small protein containing a coiled-coil domain
scnpilot_solids1_trim150_scaffold_195_curated_42
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53073..53726
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W774_9GAMM
acetyltransferase, ribosomal protein N-acetylase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_195_curated_43
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53710..55005)
DNA (1296bp) protein (432aa)
Phosphatidylserine synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR75_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_195_curated_44
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55142..55534)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W777_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_195_curated_45
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55656..58517)
DNA (2862bp) protein (954aa)
peptidase M16 n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003761A97
Peptidase M16 {ECO:0000313|EMBL:AJC46137.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
zinc protease
scnpilot_solids1_trim150_scaffold_195_curated_46
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58733..60403
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK54_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG90756.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_195_curated_47
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60526..61776
DNA (1251bp) protein (417aa)
RfaL protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP2_9GAMM
RfaL protein {ECO:0000313|EMBL:EIL88133.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipid A core-O-antigen ligase-like enyme
scnpilot_solids1_trim150_scaffold_195_curated_48
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61753..62733)
DNA (981bp) protein (327aa)
Two-domain glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK51_9GAMM
Two-domain glycosyltransferase {ECO:0000313|EMBL:EIL98627.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids1_trim150_scaffold_195_curated_49
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62853..63824
DNA (972bp) protein (324aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL07_9GAMM
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG90762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_195_curated_50
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63933..64973
DNA (1041bp) protein (347aa)
CDP-glycerol glycerophosphotransferase n=1 Tax=Dyella japonica RepID=UPI0002E3A776
CDP-glycerol glycerophosphotransferase {ECO:0000313|EMBL:AIF46458.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
glycosyl/glycerophosphate transferase
scnpilot_solids1_trim150_scaffold_195_curated_51
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65045..66751
DNA (1707bp) protein (569aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP1_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EIL98632.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_195_curated_52
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66748..67086
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLN7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88128.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_195_curated_53
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67077..67958)
DNA (882bp) protein (294aa)
Lauroyl/myristoyl acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCB1_9GAMM
Lauroyl/myristoyl acyltransferase
Lauroyl/myristoyl acyltransferase {ECO:0000313|EMBL:AGG87407.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_195_curated_54
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68218..68658
DNA (441bp) protein (147aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLN5_9GAMM
D-tyrosyl-tRNA(Tyr) deacylase
scnpilot_solids1_trim150_scaffold_195_curated_55
unknown

Not on your lists

68655..68822
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_195_curated_56
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68822..70639
DNA (1818bp) protein (606aa)
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV09_9GAMM
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase, sigma 70 subunit, RpoD
Displaying items 31-56 of 56 in total

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