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scnpilot_solids1_trim150_scaffold_112_curated

Search features with annotation key words

Displaying items 61-90 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_112_curated_61
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

70283..70726
DNA (444bp) protein (148aa)
Membrane-flanked domain n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3ECZ6_CHLL2
hypothetical protein
Membrane-flanked domain {ECO:0000313|EMBL:ACD90421.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
scnpilot_solids1_trim150_scaffold_112_curated_62
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71396..73219
DNA (1824bp) protein (608aa)
FAD linked oxidase domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS66_9GAMM
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AGG89397.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_112_curated_63
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73200..73292)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSC2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02364.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_112_curated_64
unknown

Not on your lists

comp(73298..74116)
DNA (819bp) protein (273aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_112_curated_65
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74183..74572)
DNA (390bp) protein (130aa)
Terminal quinol oxidase membrane protein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ1_9GAMM
Terminal quinol oxidase membrane protein subunit {ECO:0000313|EMBL:EIL87792.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_112_curated_66
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74701..75609
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ2_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_112_curated_67
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75713..76903)
DNA (1191bp) protein (397aa)
Sodium/glutamate symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W596_9GAMM
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97513.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
gltS; sodium/glutamate symport carrier protein; K03312 glutamate:Na+ symporter, ESS family
scnpilot_solids1_trim150_scaffold_112_curated_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77188..78129
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKJ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87737.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_112_curated_69
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78172..79551)
DNA (1380bp) protein (460aa)
Mercuric reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPZ9_9GAMM
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:AGG89600.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_112_curated_70
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79548..80441)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87738.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K06911
scnpilot_solids1_trim150_scaffold_112_curated_71
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80561..81274)
DNA (714bp) protein (238aa)
Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:KFN47475.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Pirin domain protein id=2493268 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
pirin; K06911
scnpilot_solids1_trim150_scaffold_112_curated_72
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81504..82451
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367457E
Uncharacterized protein {ECO:0000313|EMBL:KJC58255.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_112_curated_73
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82529..83416)
DNA (888bp) protein (296aa)
Pirin domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5X7_VARPE
pirin domain-containing protein; K06911
Pirin domain protein {ECO:0000313|EMBL:ADU37118.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
scnpilot_solids1_trim150_scaffold_112_curated_74
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83539..84447
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WT44_DELAC
LysR family transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ11773.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_solids1_trim150_scaffold_112_curated_75
unknown

Not on your lists

comp(84523..84657)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_112_curated_76
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84718..88224)
DNA (3507bp) protein (1169aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KIC45781.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
glycosyl hydrolase
scnpilot_solids1_trim150_scaffold_112_curated_77
unknown

Not on your lists

comp(88224..88565)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_112_curated_78
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88812..91973)
DNA (3162bp) protein (1054aa)
Similar to ATP dependent transcriptional activator id=4381772 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transcriptional activator domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
scnpilot_solids1_trim150_scaffold_112_curated_79
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92013..92888)
DNA (876bp) protein (292aa)
smuG; ssDNA-binding protein; K10800 single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
Single-strand selective monofunctional uracil DNA glycosylase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P4Q7_AROAE
Single-strand selective monofunctional uracil DNA glycosylase {ECO:0000313|EMBL:CAI07705.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scnpilot_solids1_trim150_scaffold_112_curated_80
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92999..94330)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003655565
Putative hydrolase {ECO:0000313|EMBL:GAO39375.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative hydrolase
scnpilot_solids1_trim150_scaffold_112_curated_81
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94514..95212)
DNA (699bp) protein (233aa)
Aspartate/glutamate racemase {ECO:0000313|EMBL:ELX10165.1}; EC=5.1.1.13 {ECO:0000313|EMBL:ELX10165.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Aspartate/glutamate racemase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PES8_9BURK
aspartate racemase
scnpilot_solids1_trim150_scaffold_112_curated_82
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95259..95687)
DNA (429bp) protein (143aa)
glyoxalase/bleomycin resistance protein/dioxygenase (EC:4.4.1.5)
Glyoxalase/bleomycin resistance protein/dioxygenase id=1287761 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_solids1_trim150_scaffold_112_curated_83
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95816..96313)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V428_VARPE
GCN5-like N-acetyltransferaser
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU38147.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
scnpilot_solids1_trim150_scaffold_112_curated_84
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96500..97453)
DNA (954bp) protein (318aa)
Gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E137AE
Diacylglycerol kinase {ECO:0000313|EMBL:ESW92295.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
scnpilot_solids1_trim150_scaffold_112_curated_85
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97463..97951)
DNA (489bp) protein (163aa)
CytoChrome c' n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CNI7_9RHOB
Cytochrome c signal peptide protein {ECO:0000313|EMBL:KFB10685.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
cytochrome c signal peptide protein
scnpilot_solids1_trim150_scaffold_112_curated_86
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98102..98341)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFR9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98310.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_112_curated_87
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98589..98984)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRF7_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72511.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
scnpilot_solids1_trim150_scaffold_112_curated_88
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99042..99494)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52107.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
scnpilot_solids1_trim150_scaffold_112_curated_89
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(99724..99975)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Mycobacterium avium RepID=T2GLQ3_MYCAV
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
scnpilot_solids1_trim150_scaffold_112_curated_90
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99995..100489)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A4C3C
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJA10919.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
GCN5-like N-acetyltransferase
Displaying items 61-90 of 188 in total

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