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scnpilot_solids1_trim150_scaffold_586_curated

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_586_curated_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36327..37562
DNA (1236bp) protein (412aa)
beta-ketoacyl synthase n=1 Tax=Dyella ginsengisoli RepID=UPI000346569C
Uncharacterized protein {ECO:0000313|EMBL:EIL94718.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-oxoacyl-(acyl-carrier-protein) synthase
scnpilot_solids1_trim150_scaffold_586_curated_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37598..38665
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D9CB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88245.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38662..39540
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003471664
Arginase family
Arginase family {ECO:0000313|EMBL:AGG88246.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_34
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

39675..40178
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GIH0_9BACT
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
scnpilot_solids1_trim150_scaffold_586_curated_35
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40312..40704)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEF1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97842.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_586_curated_36
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40797..42689
DNA (1893bp) protein (631aa)
Adinene-specific DNA-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT81_9GAMM
adenine specific DNA methylase Mod
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:AGG87809.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_37
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42686..45643
DNA (2958bp) protein (986aa)
Type III restriction protein res subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WT84_9GAMM
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGG87806.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA/RNA helicase, superfamily II
scnpilot_solids1_trim150_scaffold_586_curated_38
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45698..46681)
DNA (984bp) protein (328aa)
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNW0_9GAMM
Glycoside hydrolase family protein {ECO:0000313|EMBL:EIL88901.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycoside hydrolase family protein
scnpilot_solids1_trim150_scaffold_586_curated_39
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47156..48367)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0DDC
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EIL94722.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
scnpilot_solids1_trim150_scaffold_586_curated_40
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48371..48811)
DNA (441bp) protein (147aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B13EF
Putative transmembrane protein {ECO:0000313|EMBL:EIL96558.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/cationic drug transporter
scnpilot_solids1_trim150_scaffold_586_curated_41
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48808..49167)
DNA (360bp) protein (120aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B4358
EamA-like transporter family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_586_curated_42
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49170..50006)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAR5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96556.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
esterase/lipase
scnpilot_solids1_trim150_scaffold_586_curated_43
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50101..51033)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6F94
multidrug resistance efflux pump
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_586_curated_44
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51030..51797)
DNA (768bp) protein (256aa)
ABC transporter, partial n=1 Tax=Dyella ginsengisoli RepID=UPI000373D3D2
ABC-type antimicrobial peptide transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_586_curated_45
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51794..52927)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXW5_9GAMM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGG88254.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_46
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52927..54330)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347F91C
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_47
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54501..55895)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034ADFC9
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_586_curated_48
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55888..56619)
DNA (732bp) protein (244aa)
transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034B32F5
Transcriptional regulator {ECO:0000313|EMBL:AIF47378.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids1_trim150_scaffold_586_curated_49
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56685..57317
DNA (633bp) protein (211aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
sodC2; superoxide dismutase (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K8B9_STEMA
scnpilot_solids1_trim150_scaffold_586_curated_50
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57589..58758
DNA (1170bp) protein (390aa)
Porin {ECO:0000313|EMBL:KGM56108.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Phosphate-selective porin O and P id=2616549 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
phosphate-selective porin O and P; K07221 phosphate-selective porin OprO and OprP
scnpilot_solids1_trim150_scaffold_586_curated_51
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58771..59637)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2S7_DESRD
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96281.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein; K02069 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_586_curated_52
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59634..60299)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034CD5F1
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96280.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
ABC transporter; K02068 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_586_curated_53
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60333..60932)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHS3_CAUST
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_586_curated_54
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60980..61276)
DNA (297bp) protein (99aa)
arsr family transcriptional regulator n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002559460
Uncharacterized protein {ECO:0000313|EMBL:KGM56399.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_586_curated_55
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61276..61848)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255945F
Uncharacterized protein {ECO:0000313|EMBL:KGM52864.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_586_curated_56
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62104..63900)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55476.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_586_curated_57
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

64274..67204
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA95_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_586_curated_58
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67410..67970
DNA (561bp) protein (187aa)
NAD(P)H dehydrogenase (Quinone):NADPH-dependent FMN reductase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ZQ1_CUPPJ
NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
NAD(P)H dehydrogenase (Quinone):NADPH-dependent FMN reductase {ECO:0000313|EMBL:AAZ61382.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_solids1_trim150_scaffold_586_curated_59
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67984..69309)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87762.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
CBS domain-containing protein
scnpilot_solids1_trim150_scaffold_586_curated_60
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69458..70087
DNA (630bp) protein (210aa)
Pit accessory protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP3_9GAMM
Pit accessory protein {ECO:0000313|EMBL:EIM02135.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphate transport regulator related to PhoU
Displaying items 31-60 of 65 in total

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