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scnpilot_solids1_trim150_scaffold_2016_curated_5

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 3938..4666

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbJ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP30_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 242.0
  • Bit_score: 404
  • Evalue 5.40e-110
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EIM01222.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 242.0
  • Bit_score: 404
  • Evalue 7.60e-110
conjugal transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 242.0
  • Bit_score: 276
  • Evalue 9.20e-72

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAGAAGACTTGGCTGGCCGCCGCTGCGGCCGTGTTGTTCACGTGTTCATCCGCGAGTTTCGCGCAGTGGGCGGTGTTCGACGTCGCAAACTACTCGCAGAATCTGCTGACCGCCGCGCGCGAGCTGCAACAGATCGACAACCAGATCCATCAGTTGCAGAACGAAGCAACGATGCTGGTCAACCAGGGCCGCAATCTCACCAGCCTCAACTACGACTCGCTGTCGCAGTTGCTCACCACGCTGGCGACCACCAACCAGTTGATCACGCAGGCGCAGGGGTTGACCTTCAACGTCGCGCAGTCACAGGCGACCTTCAATCGGCTGTATCCGTCATCTTATGGAGCCAGCGCTACCAACGCGCAGATGGTGCAGGATGCGCAAACGCGCTGGCAGACCTCGGTGCAGGCGTTGCAGAGCGCGACGCAGATGCAGTCGCAGGCCGCGCAGAACCTGCTGTCGGACCAGAACGTCTTGAGCGGGCTGGTGACGCGAAGTCAGGGCGCGGTCGGTGCCTTGCAGGCCAGCCAGGCGACCAACCAGTTGCTCGCACTGATCGCACGCCAGGCGATCCAGGCGCAGCAGCTCACCGTCTCTCAGGATCGCGCGACGGCGCTGGACCAGGCGCGTGCGGCGGCCGATGAGGCGCAGGCTGAGCAGGTGCGTTCGCGCTTCATCGGCAGCGGCCCGCAATACACGCCGCAGTCAGTGAATTTTTACGGGAACTGA
PROTEIN sequence
Length: 243
MKKTWLAAAAAVLFTCSSASFAQWAVFDVANYSQNLLTAARELQQIDNQIHQLQNEATMLVNQGRNLTSLNYDSLSQLLTTLATTNQLITQAQGLTFNVAQSQATFNRLYPSSYGASATNAQMVQDAQTRWQTSVQALQSATQMQSQAAQNLLSDQNVLSGLVTRSQGAVGALQASQATNQLLALIARQAIQAQQLTVSQDRATALDQARAAADEAQAEQVRSRFIGSGPQYTPQSVNFYGN*