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scnpilot_solids1_trim150_scaffold_74_curated_10

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(10557..12449)

Top 3 Functional Annotations

Value Algorithm Source
Histidine ammonia-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLN6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 626.0
  • Bit_score: 1010
  • Evalue 5.60e-292
Histidine ammonia-lyase {ECO:0000313|EMBL:EIL99982.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 629.0
  • Bit_score: 1002
  • Evalue 3.70e-289
histidine ammonia-lyase similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 626.0
  • Bit_score: 1000
  • Evalue 3.10e-289

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGAGCGCAACGATACTTCTGGATGGCAACAGCTTGACGCGCGCGCAATTGGTGGCCGTCGCGCGCAACGGTGCCAAGGTGATGCTCGATGCCGCGGGCCTTGAGGCCGTGCAACGGGCGGCGGATTTCCTCGCCGAAAAGGTCACGGGGGGCGAACCCACCTACGGCGTGACCACGGGCTTCGGCAGCAATGCCGACAAGCTGCTGGGCAGCCGTCGCGTGCGCGATGGCTTGCCCGGCGCGGCGGCGACCGGCGCGTTCCAGGGCAGCCTGATGGACGAGCTGCAGCACAACCTCATCATCACCCACGCGGTGTGCGTAGGCGAGCCACTGTCGGCGGAGGTCGTGCGCGCGATGCTCGCCATTCGCATCAACACCTTGATGCGCGGGCACTCGGGGATCCGGGTGGGCACCCTTGAGGCGCTTACTGCCATGCTCAACGCCGGCGTGGTGCCGGTGGTGCCGGAAAAAGGCTCGGTGGGCGCCAGTGGCGACCTGGCGCCCTTGTCGCACCTCGCGATCGTGTTGCTTGGCCACGGCGAAGCCTTCTACCGGGGGGAGCGTCTGCCCGGTGGCGAGGCGTTGCGCCGTGCCGGCCTGGCACCGGTGCATTTGTCGTTCAAGGAGGGCCTCGCGCTCAACAATGGCACGGCGCAGATGCTGGCCATGGCGGTACTGGCGCTCGATGCGATGGAGCGCCTGTTGGACACGGCGGAATTGGCCGCGGCGATGACCCTGGATGCGTTTGCAGGCCGCAGCGGTGCATTGCGTGCGGACGTCCATGCCTTGCGGCCGCATCCGGGGCAGGTGGCAACGGCGGCCCACGTCCGCGACCTCCTGGCGGGCTCCACCTTGCTCGACATCCCCTATCACCTGGTGCCGCGCTTCCATAACTGGAATGCTCAGGCGTGGACCGGGGCGGACGACCAGGCGCTCAGCTTCGACCTCCGTTGGGATTGGGTGCCCGCTGGCGAACGCCAGGGCAAGGAGGCGTTTTATCGCCGTTTCCTGCCGTTCAAGGGGGGCAAGAAGATCCAGCCGCAGGATGCCTACAGCCTGCGTTGCATGCCGCAGGTCCATGGTGCCGTGCGCGATGCGTGGGCGCAGGCGAGCCGGGTGGTGGAGGTCGAGCTAAACGCGGTCACCGACAACCCGCTGGTGTTCCCGGAGAATGCCGACGCCCCCTGCATTGAAGAACAGGTGATCTCCGCCGGACACTTCCACGGCATGCCGCTGGCCCTGGTGCTGGCCTATTTGAAGGCGGCCATTCCGGTGCTGGCGTCGATCTCCGAGCGGCGCTTGAACAAGCTGGTGGATCCGGCCACCAACGATGGCTTGCCGGCGTTCCTCACCGGCAACGAGGACGCCACGGACTCGGGCTTCATGATCATCCAGTACACGGCTGCCGCCCTGGTCAACGACCTGGCCACGCGCGCGCACCCGGCCTGCGTGTATTCCATCCCGACCAGCGCAAACGCCGAGGACCATGTCTCCATGGGCGCGAACGAAGCACGCCACGTGCTCGACATGACCGCGGACCTGGGCCGCGTTCTGGCATTGGAGCTGCTCGTCGCGGCCCAGGCGCTGGATTACCGCCAAGCCATGCTGGCCGCCGCCCAAGGCCTGGCGCGACGCGGCGGCTGGCAGGCACTGGCACGCAAGGTCGACAATGCGCCGCGCGAGGGAGATGCCGACTTCGCGCAATTTGCCACCGAAGTGCAGCAACTGGCCACGGCACTGGACGCTGCCGGTGATTTCCACGCCGGCACCGGCGTGCGCCGGGCCCATGCGGTATTGCGCGAAAAGATCGCGTTCCTGCATCGCGACCGCGCCCTCGACGGCGACGTGCGCACCGTCTGTGCCCTGGTGGCCGACGACGCATTCCGGAGCTGA
PROTEIN sequence
Length: 631
MSATILLDGNSLTRAQLVAVARNGAKVMLDAAGLEAVQRAADFLAEKVTGGEPTYGVTTGFGSNADKLLGSRRVRDGLPGAAATGAFQGSLMDELQHNLIITHAVCVGEPLSAEVVRAMLAIRINTLMRGHSGIRVGTLEALTAMLNAGVVPVVPEKGSVGASGDLAPLSHLAIVLLGHGEAFYRGERLPGGEALRRAGLAPVHLSFKEGLALNNGTAQMLAMAVLALDAMERLLDTAELAAAMTLDAFAGRSGALRADVHALRPHPGQVATAAHVRDLLAGSTLLDIPYHLVPRFHNWNAQAWTGADDQALSFDLRWDWVPAGERQGKEAFYRRFLPFKGGKKIQPQDAYSLRCMPQVHGAVRDAWAQASRVVEVELNAVTDNPLVFPENADAPCIEEQVISAGHFHGMPLALVLAYLKAAIPVLASISERRLNKLVDPATNDGLPAFLTGNEDATDSGFMIIQYTAAALVNDLATRAHPACVYSIPTSANAEDHVSMGANEARHVLDMTADLGRVLALELLVAAQALDYRQAMLAAAQGLARRGGWQALARKVDNAPREGDADFAQFATEVQQLATALDAAGDFHAGTGVRRAHAVLREKIAFLHRDRALDGDVRTVCALVADDAFRS*