ggKbase home page

scnpilot_solids1_trim150_scaffold_74_curated_27

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(38280..38711)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 143.0
  • Bit_score: 196
  • Evalue 1.70e-47
Biopolymer transport protein {ECO:0000313|EMBL:EIM01307.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 143.0
  • Bit_score: 196
  • Evalue 2.40e-47
biopolymer transport protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 143.0
  • Bit_score: 194
  • Evalue 2.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGCGCATTGGCAACGACCGCCGCGGCGACGAGTTCGAGATCAACGTGGTGCCGTTGATCGACGTCCTGCTGACCTTGTTCATGTTCTTTGCCCTGACGAGTACCTTCGTGCAGCACGCGCGCATGCAGGTCACCTTGCCCAATGCCAGCAGCGAACCGGCGGCGGGCGAGCAGCCGGCGCTCATCATCACGGTGGACAAGGACGGGCGCTATTTCGTCGGCAGCGATCCGGTGCCGGGCACGAACATCGACGTGCTCAAGCAAAGTGTGGCCCGCGTGGCCGGTGACGACCCCAGCCGCACGGTGATGCTGCGCGCCGACGCCGCCAGCACGCACCAGAGCGTGGTCACCGCCATGGACGCGCTGGGCCAGCTCGGCTTCACGCACTTGTCGATGGCGACCACGCCGACCGCGGCCGGCAACGGGCGATGA
PROTEIN sequence
Length: 144
MRIGNDRRGDEFEINVVPLIDVLLTLFMFFALTSTFVQHARMQVTLPNASSEPAAGEQPALIITVDKDGRYFVGSDPVPGTNIDVLKQSVARVAGDDPSRTVMLRADAASTHQSVVTAMDALGQLGFTHLSMATTPTAAGNGR*