ggKbase home page

scnpilot_solids1_trim150_scaffold_74_curated_95

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(119819..121033)

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 404.0
  • Bit_score: 612
  • Evalue 5.20e-172
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 404.0
  • Bit_score: 608
  • Evalue 1.70e-171
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY01_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 404.0
  • Bit_score: 618
  • Evalue 4.00e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCTCGCGGCGCTGGCCGACGGCGAGTGCCGGGTCGTGGGCTTCCTGGAAGGCGAGGACACCCGCGCCACCGCCACCAGCTTGTCGCGTCTCGGCGTCGCCATCGACACCCCCGGGCCGGGCGAGCGCATCGTGCGCGGGGTCGGCATGCACGGCCTGCACGCGGCATCCGGGCCGCTGGATTGCGGCAATGCCGGTACCGGCATGCGCTTGCTGACCGGCCTGCTGGCGGGCCAGGCCTTCGACAGCGTGCTCACCGGCGACGCCTCGCTGTCGGCGCGGCCCATGAACCGGGTGATCGATCCGCTGGCGCGCATGGGCGCGCAGATCGACAGCCATCGCGGCTTGCCGCCCTTGCACATCCATGGCGGCCACGCCCTGCACGGCATGCGCCACCTCAGCCCGATCGCCAGCGCCCAGGTGAAGTCGGCACTGCTGCTGGCCGGGCTGTACGCCGAGGGCGACACCGAAGTGGTCGAGCCGCAGCCGACGCGCGACTATACCGAGCGCATGTTGCGCGCGTTCGGCTGGCCGGTGGATTTCACGCCAGGCCGGGCGCGGCTGGCCGGCGGCTACGTGTTGCGCGCGGCCGACGTGGAGATCCCGGCGGATTTTTCCTCGGCCGCGTTCTTCATGGTCGCCGCGAGCATCGTCGAGGGCTCGGAACTGCAGTTGCCGGCAGTCGGGCTCAATCCGCGGCGCACCGGCCTGCTGGCGGCCTTGCGCCAGATGGGGGCGGACATCCGTATCGAGAACGAGCGCCAGACCTCGGGCGAGCCCATCGGCGACATCGTGGTGCGCCATGCGCCGCTGCACGGCATCGAGCTGCCGGCGGCCCTGGTGCCGGACATGATCGACGAACTGCCGGTGTTCTTCGTCGCTGCCAGCGTGGCGGAAGGGCACACGGTGATTTCCGGTGCGGCCGAGCTGCGGGTCAAGGAATCGGACCGCATCGCCTGCATGGCCAGCGGCCTGCGTACGCTCGGGGTGGCGATCGAGGAGACGCCGGACGGGGCGATCATCCACGGCGGGCGCCTGGGCGGCGGCGTGGTTTCCAGCCACCTGGACCACCGCATCGCCATGAGCATGGTGGTGGCCGGGCTGGTGGCCCGCGCGCCGGTGCGCGTCGCCGATTGCGCAACGGTGGCGACCTCGTTCCCGGATTTCCGCGAAATCGCCAGTGACTGCGGTTTCGCCCTGCGCGTGGCCAGCTGA
PROTEIN sequence
Length: 405
MLAALADGECRVVGFLEGEDTRATATSLSRLGVAIDTPGPGERIVRGVGMHGLHAASGPLDCGNAGTGMRLLTGLLAGQAFDSVLTGDASLSARPMNRVIDPLARMGAQIDSHRGLPPLHIHGGHALHGMRHLSPIASAQVKSALLLAGLYAEGDTEVVEPQPTRDYTERMLRAFGWPVDFTPGRARLAGGYVLRAADVEIPADFSSAAFFMVAASIVEGSELQLPAVGLNPRRTGLLAALRQMGADIRIENERQTSGEPIGDIVVRHAPLHGIELPAALVPDMIDELPVFFVAASVAEGHTVISGAAELRVKESDRIACMASGLRTLGVAIEETPDGAIIHGGRLGGGVVSSHLDHRIAMSMVVAGLVARAPVRVADCATVATSFPDFREIASDCGFALRVAS*