ggKbase home page

scnpilot_solids1_trim150_scaffold_74_curated_107

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(130416..132992)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 867.0
  • Bit_score: 1246
  • Evalue 0.0
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 867.0
  • Bit_score: 1246
  • Evalue 0.0
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 867.0
  • Bit_score: 1246
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2577
GTGACCAGAAAGAAATCTTCCTCCGGGCCACGTGTCGACAAACGCACGCAAGCCCACTCGACCGCGGCCAAGCGCCGCGCTGCAGCGTCCCCTGCGCACCAGGGTGCGCCGCGCGACCCGCAGGCCGAGCGCGAAGCCCAGCGCTACGCCCGGCCTATCCCGAGCCGCGAAGCGATTCTTGCCCTGCTCGAGGCGCGCGGCGAACTGTTGAAGGAGGCACGCATTGCCGAGGCCTTGGGTCTTGACCAGGCCGAGGACCTCGACGCCCTGCACCGGCGCCTTACCGCCATGGTGCGCGACGGCCAGTTGCTGCTCGGTCGTCGCGGCGGCTACGCGCCAACGGAAAAGCTGGGCCTGATGGCCGGTACCGTCCTGGCCAACGCCGAGGGCTACGGCTTCCTGCGCCCGGATGAAGGCGGTGACGACTTGTACCTGTCGCCACAGCAGATGCGCCTGGTGATGCATGGCGACCGCGTGCTGGCCAGCGTGGTGGGCATCGACCGCCGCGGGCGGCGCCAGGGCGCGATTGCCGAAGTGCTGCAGCGTCGCTCGCCGCGCCTGGTCGGACGCGTGATCATCGAAAACGGCGTGATGCTGGTGACCCCGGACGACCGCCGCCTGCAACTGGACGTGGTGATCAAGCCCGGCGGCGAGCACGGCGCCCGTACCGGCCAGATCGTGGTGGTCGAGATCACCGACCCGCCGACGGCGGCGCGCGGGCCGCTGGGCGAGATTCGCGCCGTGCTGGGCGAGCGGCTCCAGCCCTCGCTGGTGGTGGAAATGGCGATTGCCAGCCATGACCTGCCGCAGGAGTGGCCGGATGCGGTATTGCAGGAAGCCGCCGGCGTGGCCGATACCGTTGGCAAGGCTGAATGCCAAGGTCGCATCGACCTGCGCCAGCTGCCGCTGGTGACCATCGACGGCGCCGATGCCCGCGACTTCGACGACGCGGTGTATGCCGAGCCGCGGCGTGGCGGGGGCTGGCGCCTGCTGGTGGCGATTGCCGATGTGTCGCATTACGTGCGTGCCGGCGAGGCGCTGGACCGGGAGGCGTACGAGCGCGGCACCTCGGTGTATTTCCCCGGCTTCGTGGTGCCGATGCTGCCCGAAACCCTGTCCAACGGCATCTGCTCATTGAACCCGAAAGTGGATCGCTTGTGCATGGTGTGCGACATGCTGGTCGACGCCGTGGGCGAGGTCACGCGGTCAAAGTTCTACCCGGCAGTGATGCGCTCGCATGCCCGCCTGACCTACGACCTGGTCTGGCAGGCGGTTGGCCTGGGGGCACCGGACGCGTTGCAGGCCGTGGCCGACGTGCTGCCGCAATTGCGTCAGTTGCATGGGCTGTATCGGGCCATGGCGCAGCAGCGCAAGCGGCGCGGGGCCATCGACTTCGAGACCACTGAGGTGAAGTTTCGCCTGGACCAGACCGGTGGTGTCGAATCCATGGGCGCCACGGTGCGCAACGACGCGCACAAGTTGATCGAGGAATGCATGATTGCCGCGAACGTGCAGGCGGCCCTGTTCCTGGAGAAGAAAAAGATCCCGGCCCTGTTCCGCGCGCACGAGCCGCCGCCGGCCGACAAGTACGAGGACCTGCAACAGTTCCTGCGCGAGTTCAAGTTGCGCATGCCGCCCCTGGAAGAGGTGACTCCGGCGGACTTCTCGGAAATCCTGGCCCTGGTCAAGGACCGGCCCGAGCGCGAGCTGATCCAGTCGGTGCTGCTGCGCGCGCAGAGCATGGCCGCCTACCAGCCGGAGAACCGCGGCCATTTCGGCCTGGCCTTGGACGCCTATACGCATTTCACCTCGCCAATCCGCCGCTACCCGGACCTGCTGGTGCATCGCGCGATCCGCTATGCCCTGGCCGGGGGCAAGCCCGGCGATTACCTGTACAGCCCGACCGAGATGGCGGCGATGGCCGTGCACTGCTCGCATCGCGAGCGGCGCGCCGAGGAGGCCGAACGCGATATCGACGAGCGTTTCAAATGCGCCTGGATGGAAAAGCATGTCGGCAGCGAGTTCGACGGCCTGGTCACCGGGGTCACTTCATTTGGCCTGTTCGTGGAACTCGACGAATCCAAGGTCTCCGGCCTGGTGCACATCAGCCAGTTGGCCAACGACTATTACCACTTCGACGCCATCCGCAAGCTGCTGAGCGGCGAGCGTACCGGGTTGCAGTTCCGCCTTGGTGACCATGTGCGGGTCCAGGTCCTGCGCGCCAGCCTCGAGGATCGCAAGATCGACTTCCGCCTGGTGGCACCGCGGACCCGCCAGGCCAAGGAGCAGGCCGATGGCAAGCCGCGGCAAGCCAGGCCAGTGCCCAAGGGCACGCCCGCTGCACCGTCAGCCGACCGCCGCGCTGGCGGCACGCGTGCGGCCACCAAAGCGGCGCGTGACCAGGCTGCGGGGCAGGGCGTGAAGCGTACCCGGCAAGGTGGTGGTCCGGCAAAACTCTCGGCCCGGGGCGCCAAGCCGCGCTCGCCAGCCCCGGCTCCGGCCGGCAAGGCCGCTGCCAAGACCTCGGGCAGGCGCAAGCCGGGTCGGCGATCCGGCAAGGCCGGTCGCAAGCCATGA
PROTEIN sequence
Length: 859
VTRKKSSSGPRVDKRTQAHSTAAKRRAAASPAHQGAPRDPQAEREAQRYARPIPSREAILALLEARGELLKEARIAEALGLDQAEDLDALHRRLTAMVRDGQLLLGRRGGYAPTEKLGLMAGTVLANAEGYGFLRPDEGGDDLYLSPQQMRLVMHGDRVLASVVGIDRRGRRQGAIAEVLQRRSPRLVGRVIIENGVMLVTPDDRRLQLDVVIKPGGEHGARTGQIVVVEITDPPTAARGPLGEIRAVLGERLQPSLVVEMAIASHDLPQEWPDAVLQEAAGVADTVGKAECQGRIDLRQLPLVTIDGADARDFDDAVYAEPRRGGGWRLLVAIADVSHYVRAGEALDREAYERGTSVYFPGFVVPMLPETLSNGICSLNPKVDRLCMVCDMLVDAVGEVTRSKFYPAVMRSHARLTYDLVWQAVGLGAPDALQAVADVLPQLRQLHGLYRAMAQQRKRRGAIDFETTEVKFRLDQTGGVESMGATVRNDAHKLIEECMIAANVQAALFLEKKKIPALFRAHEPPPADKYEDLQQFLREFKLRMPPLEEVTPADFSEILALVKDRPERELIQSVLLRAQSMAAYQPENRGHFGLALDAYTHFTSPIRRYPDLLVHRAIRYALAGGKPGDYLYSPTEMAAMAVHCSHRERRAEEAERDIDERFKCAWMEKHVGSEFDGLVTGVTSFGLFVELDESKVSGLVHISQLANDYYHFDAIRKLLSGERTGLQFRLGDHVRVQVLRASLEDRKIDFRLVAPRTRQAKEQADGKPRQARPVPKGTPAAPSADRRAGGTRAATKAARDQAAGQGVKRTRQGGGPAKLSARGAKPRSPAPAPAGKAAAKTSGRRKPGRRSGKAGRKP*