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scnpilot_solids1_trim150_scaffold_112_curated_179

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(214713..215423)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NC10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 233.0
  • Bit_score: 325
  • Evalue 5.30e-86
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 233.0
  • Bit_score: 325
  • Evalue 1.70e-86
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 233.0
  • Bit_score: 325
  • Evalue 7.50e-86

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGTCAGCACGCGCAGTGGATGCGGCGACCGACTTTGCCAGCCTCGATGACCATGCGCTCGTCGCGCAAGTGCTCGCCGGTCATCGCGAAGCGTTCCGCCATATCATGCAACGCAACAACCAACGCCTGTTCCGCATCGCCCGCAGCGTGGTCGGCGCGGATGCGGAAGCCGAGGACGTGCTGCAGGAATCCTATCTACGCGCGTATCGCAAACTGGACAGCTTTCGTGGGGATGCCGCCTTGCTGACCTGGCTTACCAGCATTGTGCTGAACGAGGCGCGCGGCCGTTTGCGCAAACGCCACCCCACGGTCGACGTGGATGAGATCGATATGGCCATGCAGGACGAGCGCATCGTTGCGTTTCCAGGAAAATCCAGCGCCGAGGATCCCCTCGCCGCCGCCGCGCGTTCGCAGGTGCGCCGGCTGCTGGAGCAGGCCATCGACGAACTGCCGCCGGCGTTCCGCACGGTCTACGTGATGCGCGAGATCGAAGAGTGCAGCGTGGAGGAAACCGCCGCGCAGCTGGAACTGAACCCGGAGACGGTGAAGACCCGCCTGTTCCGCGCACGGCGCCAATTGCGCGCCTCGTTGCAGGAATCGCTGGCGACCACGCTGGACGATACGTTCCAGTTCATGGGCGAACGCTGCGCGCGCCTGAGCGACGCCGTGATGGCCCGGCTTGAAGACGAACAGGCGCCGCACCCGCGCTGA
PROTEIN sequence
Length: 237
MSARAVDAATDFASLDDHALVAQVLAGHREAFRHIMQRNNQRLFRIARSVVGADAEAEDVLQESYLRAYRKLDSFRGDAALLTWLTSIVLNEARGRLRKRHPTVDVDEIDMAMQDERIVAFPGKSSAEDPLAAAARSQVRRLLEQAIDELPPAFRTVYVMREIEECSVEETAAQLELNPETVKTRLFRARRQLRASLQESLATTLDDTFQFMGERCARLSDAVMARLEDEQAPHPR*