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scnpilot_solids1_trim150_scaffold_1910_curated_5

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 4386..4889

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Dyella japonica RepID=UPI0003734EB1 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 165.0
  • Bit_score: 243
  • Evalue 1.40e-61
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 165.0
  • Bit_score: 244
  • Evalue 1.20e-61
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 166.0
  • Bit_score: 234
  • Evalue 2.10e-59

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGACGCGTTGGCGCGCGCCACAGCCGAATTCGACCGCGCTGATCACGCGCGAGGGCTTCGAGAAGCTGAAGTCCGAGGTGGATTACCTGTGGCACACCCTGCGGCCACGCGTGGTCAAGGCCCTGGCCGCTGCCGCCGCCGAGGGTGACCGCTCGGAAAACGCCGAATACACCTACCGCAAGAAGCAACTCGGCGAGATCGACCGCCGCGCCCGCTACCTGAGCAAGCGCATCCCGCAGTTGAAAGTGGTGGACACGCTGCCGGCCGACCAGGACGCCATCTACTTTGGCGCGCACATCGAAGTGGAAAACTTCAACACCGGCCAAACCACGGCCTGCCGCATCGTCGGTCCGGACGAGACCGATGCCGCCCTGGGCTGGATCAGCGTGGATTCCCCGCTCGCCCGTGCCGCGTTGAAGAAACGCGTGGGTGACGATTTCTTCTGCGAGCTGCCGGTAGGTCCCGCACACTTCGTGGTGCACGCAGTGCGCTACCAGAAATAA
PROTEIN sequence
Length: 168
MTRWRAPQPNSTALITREGFEKLKSEVDYLWHTLRPRVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRARYLSKRIPQLKVVDTLPADQDAIYFGAHIEVENFNTGQTTACRIVGPDETDAALGWISVDSPLARAALKKRVGDDFFCELPVGPAHFVVHAVRYQK*