ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_1910_curated_7

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 5480..6934

Top 3 Functional Annotations

Value Algorithm Source
Putative decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G106_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 464.0
  • Bit_score: 406
  • Evalue 3.70e-110
decarboxylase similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 464.0
  • Bit_score: 406
  • Evalue 1.20e-110
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 463.0
  • Bit_score: 643
  • Evalue 3.30e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGCTGCATGAAAACGCACCGCGCGACAGCGCGGACCTGGAGCTGTCCCCCGCCGAGATGCGCTCCATGGGCGATGCCGTGATGGCACGCGCCGTGGAGCACCTGGCCGCTCTGCCGACGCTGCCCAGCCGCGGCGACTACACTGGCATCGAGGCGCTGTGCCGATCCCTGCGCGAACCCGCGCCGGAACACGGCAGCGAGTTGCACAGCCTGCTCGAACCCTTGTTCGCGGACTGGATCCCGCGTTCGTTCAACACGCCGGGCGCCGGCTATCTCGCCTATATCCCTGGCGGCGGCGTGTTCCCGGCCGCGCTTGCCGACTTCATTGCCGACACCAGCAATCGCTTCACCGGCGTCTGGCAAGCCGCGCCGGCCCTGGTGCAGCTCGAAGCCAACACACTGGACTGGCTGCGCGATTGGATGCAGTTCCCGGCCACCACCCGCGGCCTGTTCACCACCGGCGGCTCGATGGCCATGTTCAACGCCATCGCCTGCGCGCGCGAAAAGCTGCTCGGCAACGACATCCGCGCAGGCACCCTGTACGTGTCCTCACAGACCCACCACTGCGTGACCAAGGCGGCCAAGCTGGCCGGCATCGCCCACGACCGGGTGCGCGTCGTCGCCGTCGACGGGCAGTTCCGCATGCGCACCGACGCCCTGGCCCAGGCGATCGGCGCCGACCGCGCTGCCGGGCTCAGGCCATTCATGGTGTTCTCCACCGCCGGCACCACCAACACCGGCGCCGTCGACCCGATCGACGTCATTGCCGACCTCGCCGCGCGCGAGGGGTTGTGGCACCACGTCGATGGGGCGTACGGCGGTTTCTTCCACATGGTGCCCGGGCTGCGTCCCCTGCTGCGCGGCCTGCCGCGCGCCGATTCGCTGACGCTGGACCCGCACAAGGGCCTGTTCATGCCCTACGGCACCGGCGCCCTGCTGGTACGCGACGGCGAGGCGCTGCGCGCGCTGCACTCCTCGACCGCCGGCTACCTGCCGCAGAACCAGGACGAGTTCTACGACCCGGCCCAATACGGACCCGATCTGTCCCGCGGCTTCCCCGGCCTGCGCATCTGGCTGACGCTGAAATACTACGGTGCCGCCCGCTACCGCGCCGCGCTGGCGGAAAAACGCGAGCTGGCCGTCCGGACGGCTGAGCAGGTGGCACGGATTCCCGGTGTGGTGATGGATGCGGCGCCGCAACTGTCGCTGTTCGCCTTCCACCTGGAGAGCCCGGCGCTGGCCACGCTGGAGACGCAAAACGCCGCGACCCAGGCGCTGATGGAGCGCGTTACCCGTCGCGGCCGCGTCATGCTGAGCGGGGCGCAGGTTGGCGAGCGCTATGTCGGGCGCGTCTGCGTGCTGGGCTTCCGCACCCGGCGCGCGCATATGCAGGCCTGCGTCGAGGACCTCGCCACCGAGTCCGCCACCCTCCTCGCCGAAGTCGCCGTCCGCTAA
PROTEIN sequence
Length: 485
MLHENAPRDSADLELSPAEMRSMGDAVMARAVEHLAALPTLPSRGDYTGIEALCRSLREPAPEHGSELHSLLEPLFADWIPRSFNTPGAGYLAYIPGGGVFPAALADFIADTSNRFTGVWQAAPALVQLEANTLDWLRDWMQFPATTRGLFTTGGSMAMFNAIACAREKLLGNDIRAGTLYVSSQTHHCVTKAAKLAGIAHDRVRVVAVDGQFRMRTDALAQAIGADRAAGLRPFMVFSTAGTTNTGAVDPIDVIADLAAREGLWHHVDGAYGGFFHMVPGLRPLLRGLPRADSLTLDPHKGLFMPYGTGALLVRDGEALRALHSSTAGYLPQNQDEFYDPAQYGPDLSRGFPGLRIWLTLKYYGAARYRAALAEKRELAVRTAEQVARIPGVVMDAAPQLSLFAFHLESPALATLETQNAATQALMERVTRRGRVMLSGAQVGERYVGRVCVLGFRTRRAHMQACVEDLATESATLLAEVAVR*