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scnpilot_solids1_trim150_scaffold_5290_curated_1

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(3..491)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Dyella ginsengisoli RepID=UPI000344FA78 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 163.0
  • Bit_score: 309
  • Evalue 2.70e-81
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 163.0
  • Bit_score: 305
  • Evalue 5.50e-80
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 304
  • Evalue 2.10e-80

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGACTGAAAGTTTTGCCGAACTGTTTGAACAGAGCCAGCAGGCCATTGCCAAGCTGAAGCCCGGAGCCATCGTCACGGGCATCGTCGTTGAAATCCGCAATGACGTGATCGTGGTCAATGCCGGCTTGAAGAGCGAGGGTATTGTCCCGATCGAGCAATTCAAGGACGAGAAGGGTGAACTGGAAGTCCAGGTCGGCGACGAGGTCAAGGTGGCCCTCGAGGCACTGGAAGACGGTTTCGGCGAGACCAAGCTGTCGCGCGAGAAGGCCAAGCGTTCCATGGTGTGGGACGACCTGGAGCAGGCGTTCGACAAGGAAGAGACCATCAGCGGCATGATTTCCGGCAAGGTCAAGGGTGGCTTTACCGTCGACATCAAGGATGTCCGCGCGTTCCTGCCGGGCTCGCTGGTCGACGTGCGTCCGGTGCGCGATCCGGCCTACCTCGAGGGCAAGGAGCTCGAGTTCAAGATCATCAAGCTCGACCGCAAG
PROTEIN sequence
Length: 163
MTESFAELFEQSQQAIAKLKPGAIVTGIVVEIRNDVIVVNAGLKSEGIVPIEQFKDEKGELEVQVGDEVKVALEALEDGFGETKLSREKAKRSMVWDDLEQAFDKEETISGMISGKVKGGFTVDIKDVRAFLPGSLVDVRPVRDPAYLEGKELEFKIIKLDRK