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scnpilot_solids1_trim150_scaffold_637_curated_17

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 19882..20547

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 216.0
  • Bit_score: 229
  • Evalue 2.90e-57
Negative regulator of sigma E activity {ECO:0000313|EMBL:EIM01406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 216.0
  • Bit_score: 229
  • Evalue 4.00e-57
negative regulator of sigma E activity similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 221.0
  • Bit_score: 217
  • Evalue 6.00e-54

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAATCAGGTGCATGTGAATCAGGAAGCACGTGAAGCCTTGTCGGCCGGGGTCGACGGCGAGCTGGCGGCCCCCGAATGGCGCTTCCTGCTGCGACGTGTCGACCACGACGAGGAGCTGCAGCGCGCCTGGTCACGTTATCACCTGATGCGCGAAGGCCTGCGCGGGCGCATGCCGGCATTGGCCAGCGCCGGGTTTGCGGCGCGGGTGGAGGCGGCGATTGTGCGTGAAGCCGCCCCCGCAGGCGGGCGCCGCCGGCACTGGCTGCGCTGGTCGGCAGGCGGTGCCATTGCCGCGAGCGTGGCCGTGGCGACCTTGATGGTCGGCCACCCATCCAACGACCCCGAGCCGGTGATCGCGGCGCAGAGCACGAGCCAGGATGCCGGAGCGCCAGTCGAGGACACCTACGCCAGCCGCGTCACCACCATGCCGTCCGCGGTGCCGCCGTGGTTGAGCGGTGGCGCTGCCGGTGCGCTGAGCCAGCCTGCATCGGCCACCCTGGGCGCGCCATTCACCGAGGTTTCCGCCCGGCCGGCGATGTCCTCGTCAGGATATGCGGTACCGCTGTTCCGCCAGCGTACGCTGGACAATGGCAACGGTTCCTATCTGTTGCTGATCGATGCTGCACGTAGTGCGGGTCCGCACGACGCGTCGGTTCCCCAATGA
PROTEIN sequence
Length: 222
MNQVHVNQEAREALSAGVDGELAAPEWRFLLRRVDHDEELQRAWSRYHLMREGLRGRMPALASAGFAARVEAAIVREAAPAGGRRRHWLRWSAGGAIAASVAVATLMVGHPSNDPEPVIAAQSTSQDAGAPVEDTYASRVTTMPSAVPPWLSGGAAGALSQPASATLGAPFTEVSARPAMSSSGYAVPLFRQRTLDNGNGSYLLLIDAARSAGPHDASVPQ*