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scnpilot_solids1_trim150_scaffold_7021_curated_2

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(797..2089)

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbI n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037450AB similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 430.0
  • Bit_score: 724
  • Evalue 5.50e-206
Conjugation TrbI family protein {ECO:0000313|EMBL:EIM01227.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 430.0
  • Bit_score: 703
  • Evalue 1.80e-199
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 426.0
  • Bit_score: 523
  • Evalue 5.80e-146

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGACACAACTGACCGCGAAACCCAGCCGACCCCGAAAGTCGCGCCCGAGGGCATGGCACTGCGCGCGGCGCCGCGTCCGGTCACGCGGCTCAACCGGCGTACGCTCGCGGTGTCCACCACGCTCCTGGTGGTCGCGGTTGCCGCAGCCTCGATGTGGGCACTGCAATCGAAGGGCAGACGCAACCCCGCCAATCAGACCAACCTCTACAACGTCGATCGCGTCGCCAAGGCCGACGACCTCGACCAGTTGCCGGCCGACTATTCCAAGCTGCCCGAGAAGCCCGCACCGGCTCCTGCCGCGAGCGTGCCCCAGCTCGGGCCGCCGTTGCCCGGTGATGTAGGGGTGGCTTCGGCTGTGACGCCATTGCAAAGCGGCGCTGTGAACCAAGGGCCGTCGGCCGAGAGTGTCGATCGGCAGCGCCAGGCCGAAGAAGTCGCGCGGTCGGCGGTGTTCTTCCGTACCAGCAACAACACGGGAAAGCCCGACGCCGCTTCGGCAAGGGCGAACACCTTGCCGGTGGCCAATGCCGCCGCCGGTGCATTCAATCCGATGGGCGCCGGCCCGGCTTCCACGGCGGCACAGCCCAACGATCCGATGGCCATCCAGAATCGGCAAGGGCAGAAGGAAGCGTTCATGGCGAAGGGTGGCGATGCCGCGACGAGCAACACCGGCACCCTCCAGACGCCGGCTTCGCCGTACACCGTGATGGCCGGAACCATCATTCCGGCCGCGCTGATTACCGGGATCAACTCCGACCTGCCGGGGCAGATCATCGCCGAGGTGACGCAGCCGGTGTACGACACCGCGACGGGCCACTATCTCTTGATTCCGCAGGGTTCGCGCCTGATCGGCCGCTACGACAGTCAGGTGGCCTTCGGGCAGCGGCGCGTGCTGCTGGTGTGGCTGCGTCTGGTGCTGCCCGACACCTCATCGATTGCCTTGGACAAGCTGCCCGGCATCGACCCCGCGGGCTATGCCGGCTTGGAGGACGGCGTGGACTGGCACTGGAGCCGCATCTTGGCGGGTGCGGCGCTGTCCACGCTGCTGGGGGTCAACGCCGAACTGGCCGTCTCCAATCAGAATCAGGCCAACGGCAACACCGTGATCGCTTTGCGCGACAGCGCGCAGGACACCACCAACCAGATCGGCCAGGAGATCACCCGGCGCAACCTGAGCATCCAGCCGACGCTGACCGTGCGGCCGGGATTCCAGGTCAACGTCATGGTCAATAAGGACTTGATGCTGCGGCCGTACCAGCCACTTTTCATCCAGCGAGGGCCGATGCCGTGA
PROTEIN sequence
Length: 431
MDTTDRETQPTPKVAPEGMALRAAPRPVTRLNRRTLAVSTTLLVVAVAAASMWALQSKGRRNPANQTNLYNVDRVAKADDLDQLPADYSKLPEKPAPAPAASVPQLGPPLPGDVGVASAVTPLQSGAVNQGPSAESVDRQRQAEEVARSAVFFRTSNNTGKPDAASARANTLPVANAAAGAFNPMGAGPASTAAQPNDPMAIQNRQGQKEAFMAKGGDAATSNTGTLQTPASPYTVMAGTIIPAALITGINSDLPGQIIAEVTQPVYDTATGHYLLIPQGSRLIGRYDSQVAFGQRRVLLVWLRLVLPDTSSIALDKLPGIDPAGYAGLEDGVDWHWSRILAGAALSTLLGVNAELAVSNQNQANGNTVIALRDSAQDTTNQIGQEITRRNLSIQPTLTVRPGFQVNVMVNKDLMLRPYQPLFIQRGPMP*