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scnpilot_solids1_trim150_scaffold_7021_curated_4

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(3080..3739)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP33_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 219.0
  • Bit_score: 410
  • Evalue 1.20e-111
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EIM01225.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 219.0
  • Bit_score: 410
  • Evalue 1.60e-111
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 218.0
  • Bit_score: 336
  • Evalue 6.70e-90

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
CCCGCGACGCCTTATCAGGCGGCCGCGCAGGTGTGGGACGAACGCCTTGGCAGCGCCCGCGTACAGGCCAGGAACTGGCGGCTGATGACCTTCGGCTGCCTGGGGCTTGCGCTGCTGATGGCAGTCGGCCTCGTCTGGCAGGCCGGCCAGTCGCGCGTCACGCCCTACGTGGTCGAGGTCGATCACGCAGGGCAAGTTCGCGCGGTCGGAACGGCGATGACGCCGTACAAGCCCACCGATGCGCAAATCGCCTGGTATCTCGCGCGCTTCATCACCGACGTGCGCTCGCTCTCCATCGACCCGATCGTGGTGCGGCAGCACTGGCTCGAAGCCTACGGCTACACCACCGACAAGGGCGCGGCGACGCTGAACGCCTACGCCCGCGCCCACGATCCGTTTGCCCACGTCGGGCAGGACTCCGTATCGGTGGACGTCGCCAGCGTGGTGCGCGTGAGCGACGCGTCGTTCCAGGTGCGCTGGACCGAACAGCACTACCACGAGGGCACCCCTACGGGCAGCGAGCACTGGACCGCGATGTTGACGCTGGTCATGCAGACCCCGCGCACCGAGCAGCAGGTGCGCCACAACCCCCTCGGCATCTACGTCAACGGCCTGTCCTGGAGCCGCGACCTGGATGCACCCCAAGGAGTCAAGAAATGA
PROTEIN sequence
Length: 220
PATPYQAAAQVWDERLGSARVQARNWRLMTFGCLGLALLMAVGLVWQAGQSRVTPYVVEVDHAGQVRAVGTAMTPYKPTDAQIAWYLARFITDVRSLSIDPIVVRQHWLEAYGYTTDKGAATLNAYARAHDPFAHVGQDSVSVDVASVVRVSDASFQVRWTEQHYHEGTPTGSEHWTAMLTLVMQTPRTEQQVRHNPLGIYVNGLSWSRDLDAPQGVKK*