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scnpilot_solids1_trim150_scaffold_341_curated_15

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(17053..17937)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VGW5_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 294.0
  • Bit_score: 451
  • Evalue 6.10e-124
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY57470.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 295.0
  • Bit_score: 457
  • Evalue 1.20e-125
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 445
  • Evalue 1.10e-122

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCAAGCGCAACTTCAACGACCTGCTCGCCTTTGTCACGGTGGCGCGCGAAGGCAGCTTCACTCGTGCGGCTGCCGTGCTGGGCGTGACCCAGTCCGCGCTCAGCCAGACCGTCCGCGCGCTGGAGGCACGCCTGGACATCCGGTTGCTCACCCGCACCACCCGCAGCGTCTCCCCGACCGAGGCCGGCCAGCGCCTGGTCGAGACCATCGGCCACCGCTTCGAGGAGATTGAGGCCGAAGTGGACGCGCTGACCGCCCTGCGCGACAAGCCGGCCGGAACGGTGCGCATCACCTCGTCCGATCACGTGCTGCACGCCACGCTGTTGCCGCGGCTGGCACCGTTGCTGCGCGAGTACCCGGACATCGCGATTGAGTTCGATGTGAGCTACGGATTCCGCGATATCGTGGCCGATCGCTTCGACGCCGGCGTACGCCTGGGCGAGAGCGTTCACCAGGACATGATCGCGATGCCGATCGGGCCGAAGCTGCGGATGGCCGCGGCCGCCTCGCCGGACTATTTCGCACGCCATCCGCCGCCGAGGGTGCCCGGCGACCTCATGCGCCACATCTGTATCAACCTGCGTCAGGGCCGTGGCGGCCTGTACGCCTGGGAATTCGAGCGCCGCGGCCGCGAACTGGAGGTGCGGGTGGAAGGCCAGGTGATCGTCAACACCTCGCCGCACATGGTGACGGCCGCGCTCGCCGGGCTGGGCATCGCTTTCCTGCCCGAGGACGAATTCGGCACGCACATTACCGAAGGGCGCCTGGTCCGCGTGCTGGCGGACTGGTGCCCGCCGTTCCCCGGCTACCACCTCTACTACCCGAGCCGCCGGCATCCGTCACCCGCGTTCTCGCTGGTACTCGAGGCGCTGCGGCAGTAA
PROTEIN sequence
Length: 295
MAKRNFNDLLAFVTVAREGSFTRAAAVLGVTQSALSQTVRALEARLDIRLLTRTTRSVSPTEAGQRLVETIGHRFEEIEAEVDALTALRDKPAGTVRITSSDHVLHATLLPRLAPLLREYPDIAIEFDVSYGFRDIVADRFDAGVRLGESVHQDMIAMPIGPKLRMAAAASPDYFARHPPPRVPGDLMRHICINLRQGRGGLYAWEFERRGRELEVRVEGQVIVNTSPHMVTAALAGLGIAFLPEDEFGTHITEGRLVRVLADWCPPFPGYHLYYPSRRHPSPAFSLVLEALRQ*