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scnpilot_solids1_trim150_scaffold_341_curated_21

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(22529..24262)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FKD8_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 557.0
  • Bit_score: 636
  • Evalue 2.00e-179
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ENZ93834.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 557.0
  • Bit_score: 636
  • Evalue 2.80e-179
virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 556.0
  • Bit_score: 499
  • Evalue 1.20e-138

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Taxonomy

Xanthomonas fragariae → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
ATGAGTACGCTACGCGGCAAGACGATGGTCCTGGGCGGCCTGTTGCTGCTGGCCCTGGCCGGCGGGCTGTGGCTCAGTGGCTGGCTCACCCTGTGGCTGCTCGGGCTGCGCGATCCACTCCAGTTCGGCACTTACCTGGATTATGTCCGGGCGCTGGACCTGGATACCGTCCGGCCCTATGCCACGACCATCCGCCTCGCCGGCTGGACCGGCTTCGGGCTGCCCCTGGCGTCGTGGCTGATCGCTGCCACCGCCATGCTCTGGCCGCGGGCACGCGCCCTCCACGGCAATGCCCGCTTCGCCACCCGTGCCGACATCGCCCGCGCCGGCCTGCTGCAAGCCGGCCCCGAAGGCATCCTCATCGGCCGCTACCGCGGCGACTATCTCTATCTCGGCGGCACCCGGCACGTCATCCTGACCGCCCCGACCCGCAGCGGCAAGACCAGCTCCGTCGCCATCCCGGTGTTGCTGACCTACCGGCATTCCGTGGTCTGCCTCGACCTCAAGGGCGAGCTCCATCAGGCGACCAGCGGCTACCGTGCCGCGACCGGGCAAGTGATCTACCGCTTCGCGCCGTACGCCGAGGACGGCCGTACCCACCGCTTCAACCCGCTCACGGCCGTTTCCGCCGACCCGCGCCTGCGTGTCTCCGAACTGCAGACGCTGGCCACCATCCTGTATCCCGACGAGGCCGGCAAGGACCCGTTCTGGAGCCTGCAGTCGCGCGCCGCGTTCGTGGCTTTTGCCGCCTGGTTGTTCGAGGCCTGGGACGCCAGGGCCGCACCGGCCACGGGTGCCAACCCGGATAACCCCAAGGACGATCCGACCTTCCCCAGCCTGGAGCGCATCCACCGTTTTTCCACTGGCGATGGCGGTGAGCTGAAGGCCTTCCTGCGGGAGCGCATGGCGGCGCCCTTCGTCAACACCACTACGCGCACCGCGCTTGGCAGCCTGATCAACATGGCGGAGCAGACGTTTTCCTCGGTGATCGCCACCACCCAGGCACCGCTGCAGCAATTCCTGAGCCCGACCCTGGCTGCCGCCACGAATGCCACCGACTTCGACGTGCAGCAGTTGCGCCGCCGCCCCAGCAGCGTCTACGTGGTGATCCCGCCCCACCGGCTCGGCGAGGCTCGCAAGCTGCTCAACCTGTTCTTTTCCGTGGTGCTCGGGCAGAACCTCCGTCAGACCCCGCAGGAAGATCCGTCGAGCAAGTACCAACTGCTGCTGTTGCTGGATGAGTTCACCGCCATGGGCCGCGTCGATGCGCTGTCCTCACGCATCGCGCTCACCGCCGGCTATGGCGTCCGCGACCTGTCGATCATCCAGAGCCTGTCGCAGCTCGACGCCACCTATGGCGCCGACGAGGCCCGCAGCTTCCTCACCAACCACGCCGCCAGCGTCGTCTTCACCCCGCGCGAGCAGCACGACGCCGAGGCCTACTCGACCGCGCTCGGCGACACCACGGTCAAGCGGCGCAATCGCAGTACCGGCAAAGGTGGCACGACGTACACCCATACCGAGGAACGCCGGGCGTTGCTGCTGCCGCAGGAATTGAAGGAGCTGCCGGACGACGAGGAGCTCATCTTCCTGGAAGGCTGCCGGCCCATCCGCTGCCGCAAGAACTGGTACTTCAAGGATCAAAGGCTGCGGCGCCGCATCCTGCCACCGGTTGCGCCCCCGCCACGGCCATGTGCCGATCACGCTAAGCCGGTGGCACCTCCCCGCCACTGA
PROTEIN sequence
Length: 578
MSTLRGKTMVLGGLLLLALAGGLWLSGWLTLWLLGLRDPLQFGTYLDYVRALDLDTVRPYATTIRLAGWTGFGLPLASWLIAATAMLWPRARALHGNARFATRADIARAGLLQAGPEGILIGRYRGDYLYLGGTRHVILTAPTRSGKTSSVAIPVLLTYRHSVVCLDLKGELHQATSGYRAATGQVIYRFAPYAEDGRTHRFNPLTAVSADPRLRVSELQTLATILYPDEAGKDPFWSLQSRAAFVAFAAWLFEAWDARAAPATGANPDNPKDDPTFPSLERIHRFSTGDGGELKAFLRERMAAPFVNTTTRTALGSLINMAEQTFSSVIATTQAPLQQFLSPTLAAATNATDFDVQQLRRRPSSVYVVIPPHRLGEARKLLNLFFSVVLGQNLRQTPQEDPSSKYQLLLLLDEFTAMGRVDALSSRIALTAGYGVRDLSIIQSLSQLDATYGADEARSFLTNHAASVVFTPREQHDAEAYSTALGDTTVKRRNRSTGKGGTTYTHTEERRALLLPQELKELPDDEELIFLEGCRPIRCRKNWYFKDQRLRRRILPPVAPPPRPCADHAKPVAPPRH*