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scnpilot_solids1_trim150_scaffold_106_curated_4

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(3307..4161)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 288.0
  • Bit_score: 384
  • Evalue 8.90e-104
Beta-barrel assembly machine subunit BamD similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 271.0
  • Bit_score: 380
  • Evalue 4.00e-103
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 273.0
  • Bit_score: 388
  • Evalue 6.60e-105

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGCGTGTAACAAAGCAGTCGATGCGTCCATCGTGTGCCGCGAAGTACCTGCTCATCGTGGCGCTGGCCGCCCTGGTCGGCGGGTGCTCCATCTTCGGCACCAAGCAGCGGGACGACAACCTGCCAGTGGATGCGCTGTACAACAAGGCCCATGCCGCCCTGGTAGAAGGCCGCTACAGCACCGCCGCCACGAGCTACCAGCGCCTGATCGCGCGCTTTCCCTCGGGCGAATACAACGAGCATGCGCAGCTGGAACTGGCCTACGCGCAATACAAGGACAACAAGCCGGATGACGCCTTGTCCACCATCAACCGCTTCATCAAGACCTACCCGGCCAACCAGCACGTCGACTACGCCTACTACCTGCGCGGCCTGATCGATTTCGACCGCGACGGCAGCGGCATCCTGACCACCTTGCGCGGCGGCGAAAGCGGGACGGCACGGCGCGATCCGGCGCCATTCCTGCAATCGTTCGACGACTTTTCCGAACTGTCGCGCCGGTTTCCCAACAGCGCGTATGCGGCCGATGCGCGCCAGCGCATGATCTACCTGCGCAACATGCTGGCCCAGTACGAGATCAACATCGCCGAATTCTACCTGCGCCAGCGCGCCTATATTGCCGCCGCCGACCGCGCGCAATACGTGGTGGAGCACTACCAACAGGCGCCGCAAGTCGCCGATGCGCTGGCCCTGCTCACCCGCTGCTATATCGCGCTCAAGCAGGACAAGCTGGCCGAGCAAAGCCGCAAGGTGCTGACACTCAACTATCCGGACCACCCGTACCTGAGCGATCCGAAGTGGCCGCGCGCGCCCTCCACGCTGCGCAAGATGATCCCGTTCTCCGGCCACCAATAA
PROTEIN sequence
Length: 285
MRVTKQSMRPSCAAKYLLIVALAALVGGCSIFGTKQRDDNLPVDALYNKAHAALVEGRYSTAATSYQRLIARFPSGEYNEHAQLELAYAQYKDNKPDDALSTINRFIKTYPANQHVDYAYYLRGLIDFDRDGSGILTTLRGGESGTARRDPAPFLQSFDDFSELSRRFPNSAYAADARQRMIYLRNMLAQYEINIAEFYLRQRAYIAAADRAQYVVEHYQQAPQVADALALLTRCYIALKQDKLAEQSRKVLTLNYPDHPYLSDPKWPRAPSTLRKMIPFSGHQ*