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scnpilot_solids1_trim150_scaffold_106_curated_13

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(15764..16126)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein, FmdB family n=1 Tax=Xanthomonas sacchari RepID=UPI00026300A5 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 113.0
  • Bit_score: 138
  • Evalue 3.60e-30
Regulatory protein, FmdB family {ECO:0000313|EMBL:AJC44440.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 115.0
  • Bit_score: 136
  • Evalue 2.50e-29
putative regulatory protein, FmdB family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 99.0
  • Bit_score: 134
  • Evalue 2.10e-29

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGCCGATCTATGAATTCGAGTGCCGCGCGTGCGGCCATCGTTTCGACCACCTGCAGAAACTGTCCGACCCGGACCCGAAGGTGTGCCCCAACTGCCACGCCGAGCAGCTGCAGCACATGCTCAGCGCGCCGGCGTTCCGCCTGGCCGGCAGCGGCTGGTACGAGACCGACTTCAAGAAACCCGGCGACCAGCGGCACAACTTGGCCGGCGACGCCGGCGCGCCGCATGCGAACGGCCATCACGAACCCGCCGCGGCCAAGCCCGCAACCGCCAATGAGGGCACCGGAGCCACAGCCGTGCCAGCGCCAACGCCTGCAGTCGCCAAACCCGCCGGCGACAAGGCCGCTGCCGCCGCCGGTTAG
PROTEIN sequence
Length: 121
MPIYEFECRACGHRFDHLQKLSDPDPKVCPNCHAEQLQHMLSAPAFRLAGSGWYETDFKKPGDQRHNLAGDAGAPHANGHHEPAAAKPATANEGTGATAVPAPTPAVAKPAGDKAAAAAG*