ggKbase home page

scnpilot_solids1_trim150_scaffold_517_curated_32

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 25276..25515

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome C biogenesis protein CcmD n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT35_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 70.0
  • Bit_score: 92
  • Evalue 2.60e-16
Cytochrome C biogenesis protein CcmD {ECO:0000313|EMBL:EIM02627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 70.0
  • Bit_score: 92
  • Evalue 3.60e-16
heme exporter protein CcmD similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 58.0
  • Bit_score: 84
  • Evalue 1.70e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGAGCAGTTCGCTGCAGGCGTTCCTGGCCATGGGCGGCTACGCGGCCTATGTCTGGCCGGCGTACGCGGTATTCTTGCTGGTGTTGCTTGGCGACACCCTGGTACCGACGCTGCGCCGCCGCCGCATCGTGCGGGAACTGCGCGCACGGCTGGTGCGCCAGGCGGCACGCCAGGACGCTGCCCACGCGGCGCCTGTCGCTGAGTCGGGCGCCGCTGCGGCGCCCTCGAGGTCAAGATGA
PROTEIN sequence
Length: 80
MSSSLQAFLAMGGYAAYVWPAYAVFLLVLLGDTLVPTLRRRRIVRELRARLVRQAARQDAAHAAPVAESGAAAAPSRSR*