ggKbase home page

scnpilot_solids1_trim150_scaffold_113_curated_55

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(58794..59585)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030549C7 similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 267.0
  • Bit_score: 122
  • Evalue 5.80e-25
Peptidase A1 pepsin {ECO:0000313|EMBL:ETK14303.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 259.0
  • Bit_score: 127
  • Evalue 3.30e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 270.0
  • Bit_score: 120
  • Evalue 9.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. FH1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGTTCACGGATAGCGCATGGCGCAACGAATTCGGTTCGTTGATGCGACTTGAAGCCGGCGAGGGCGGCCGGCTCAGGGGGCTGTACCGCTCCACGACCGGGGCCAGCGGCGACTATCCCGTCGTCGGATTCATCGAGCCCGGCGCCACCGCGCCGGGACGGGGGCGGGCCATGGCCCTGGCCATCAGCTGGCGCCAGCTCGACGACCCGGTGGACGAGGACGGTACCCATTGGGTGTCGGGCCTGTGCGGCCAGCTCATGCCTGCGGCAGCGGGCGGGCGCATGACGCTGCTGCACAACCTGGTCGTTTCGACCTCGGACACGCCGCTGCACCACCTCGGCTTTCATCTCGACAAGCTGGCCTACGACGCCATGGACGAACCGGACCTTCCTTCCGCGAGGCCCGCCGGGCGCAGCGGCATTGCCGCGGACCACCCGCTGTCCGGCAGCTGGGTCCTGGCCTCGGACGAGCCCCGGATGCGGCTGGAACTCCAGGTGACGGAGCACGGCGAAGTCCTCGGCATCTGGAACGAAGCCGGAATCCATCCGCGACATGTTCCAGGCGAGCTCCGCGGCTTCACCGACTGGCTGGCGCCGATGCCCCCGTTGCGCAGCGTGGCGCTCTGCGGCTGGTCGGCGCAGCGCCGGTGCGCGTGGAACCTGTCCGGCTGGCTTGAGCCGGGAAAGGCCGATCTCCACCTGCTCCAGCTCTGCAGCTACGGCACGGAGTACGGCGACCGCTACTTGCAGACCCAGGTGCAAAGCCTGCACTTCCACCGGCCGGGCGGATAA
PROTEIN sequence
Length: 264
MFTDSAWRNEFGSLMRLEAGEGGRLRGLYRSTTGASGDYPVVGFIEPGATAPGRGRAMALAISWRQLDDPVDEDGTHWVSGLCGQLMPAAAGGRMTLLHNLVVSTSDTPLHHLGFHLDKLAYDAMDEPDLPSARPAGRSGIAADHPLSGSWVLASDEPRMRLELQVTEHGEVLGIWNEAGIHPRHVPGELRGFTDWLAPMPPLRSVALCGWSAQRRCAWNLSGWLEPGKADLHLLQLCSYGTEYGDRYLQTQVQSLHFHRPGG*