ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_288_curated_3

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(3083..4276)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379DBFE similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 381.0
  • Bit_score: 433
  • Evalue 1.80e-118
Uncharacterized protein {ECO:0000313|EMBL:EYR65442.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 390.0
  • Bit_score: 461
  • Evalue 1.50e-126
group 1 glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 381.0
  • Bit_score: 354
  • Evalue 4.30e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGTTGTCGGACGTCTACTTCCCGCGCATCAACGGCGTTTCCACCTCCATCCGCGCTACCGCCCGGTGGCTGGTACGCGCGGGCCACGACGTGACGCTGGTCGCGCCGGACTATGGCGATCCGGCCCAGCTTCAGCATGACGCCGAACTGGGCGCCCATTTCCAGGTGTCGCGGTTGCCGGCCAGACGCATTTTTTTCGACCCCGAGGATCGCCTGATGCGCATGGATGCGCTGCGACGCGTGGTGCCTGCCTTGGCCGCCGGCGCGTGGGACGCGGTGCACGTACACACGCCGTTCCGAGCGCACCAGCTTGGCATGCGCCTGCGGCGATCGACCGGCTGCCGGTTGGTCGAGACTTACCACACCTATTTCGAGGCCTATATTGGCCACTACCTGCCTTGGTTGCCGCGCCGCGCGAGCGAGGTGTTTGCAAGGCACACGTCACGCCGGTTGTGCAATGCGGTGGATCACATCGTCGCACCGACGGCGGAAATGGCAGCGGTACTCACGCGCTATGGCGTGCGTACCGCAAGCACCGTGCTGCCCACGGGCCTCGACCTGGACGAGCTCCGGGATGGCGATGGCGAGGCGTTTCGCGCACGACACGACATTGCGCGGAACCGCCTGGTGCTGCTCACGATCAGTCGGCTTGCACGCGAGAAGCAGATCGACTTCCTGCTGCGCGTCGCGCGCGAACTGGTTCCGCGGTTCCCGGCGTTGCTGATGGTCATCGCCGGAGAGGGTCCGGACGAGCGGCGGCTGAAGACGCTGGTACAAAACCTTGAACTGCAGGCGCACGTTCTCTTTCTCGGCAATCTCGATCGCCGCGGAGCGCTGCTGGATTGCTATCGCGCCGCCGATCTGTTCGTCTTCGCATCGCCCACGGAGACGCAGGGCCTGGTGCTGATCGAGGCAATGGCGCTTGGCGTGCCGATCGTCTCCACCGCCGTGATGGGGACCGCAACGGTGCTGCGCGGTGCGCACAGCGCCTGCATCGCGCCCGAAGACGTGACGGGGTTTGCACAGAGCGTGGCCGGTTTGCTGAAGCAGCCGGAGCGTCGCGCCGCGATGGCAGCCTCGGGTCCGGGCGATGCGCGCGCCTGGAGCGTCGACGCGATGATGGCGCGCCTCCTCCCGGTATACGTGACTGGGGCCTCCTCATCATCCGCCTGCACTGGTGAAACCCCGAAATAA
PROTEIN sequence
Length: 398
MLSDVYFPRINGVSTSIRATARWLVRAGHDVTLVAPDYGDPAQLQHDAELGAHFQVSRLPARRIFFDPEDRLMRMDALRRVVPALAAGAWDAVHVHTPFRAHQLGMRLRRSTGCRLVETYHTYFEAYIGHYLPWLPRRASEVFARHTSRRLCNAVDHIVAPTAEMAAVLTRYGVRTASTVLPTGLDLDELRDGDGEAFRARHDIARNRLVLLTISRLAREKQIDFLLRVARELVPRFPALLMVIAGEGPDERRLKTLVQNLELQAHVLFLGNLDRRGALLDCYRAADLFVFASPTETQGLVLIEAMALGVPIVSTAVMGTATVLRGAHSACIAPEDVTGFAQSVAGLLKQPERRAAMAASGPGDARAWSVDAMMARLLPVYVTGASSSSACTGETPK*