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scnpilot_solids1_trim150_scaffold_176_curated_31

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(31881..33110)

Top 3 Functional Annotations

Value Algorithm Source
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 411.0
  • Bit_score: 675
  • Evalue 2.80e-191
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99659.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 411.0
  • Bit_score: 675
  • Evalue 3.90e-191
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 410.0
  • Bit_score: 603
  • Evalue 5.50e-170

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGAATTGCGACCCATACTTTCCACGCTGCGCCGGCACAAGATCACCGCCACTTTGCTGATCCTGGAAATCGCGCTGACCTGCGCCATCGTGTGCAACGCGGTGTTTCTGATCGGCCAACGCCTGCAACACATGGACATGACCACCGGTATCGACGAGCACGCGTTGTTGCAGATCCAACTGGCCGAGATCGCCCCCACGCCGGACATCTATGCGCGGGCCAGGGAGGATCTGGCCGTATTGCGGCAGGTGCCGGGCGTGCAGGCGGCGGCGCTGACCAACCAACTGCCGCTCGGTGGATCCTCGTCCAACTCGAGCATCAAGCTGGACCTGGCGCAGCGCCAGCCCAACCTCAGCGCCGGTACCTATTTCGGCCAGGATTTGCCGCAGACCATGGGCGCGCGGTTGATCGCAGGGCGCTACCTGCAAGCCGACGAGTTCGTCGATGCGGGCATCGTGTTGAAGGCGCTCGCCACTGGTGACACGAAGCAGTTGCCCGCCGTGACCGTGATCACCCAGGCCATGGGGGAGCGACTGTGGCCAGGGCAAAACCCGTTGGGCAAGACGCTTTACATCGGTCCGGTTGGCGTGCGCGTGGTTGGCGTGCTGGCGGACCTGGCGCGCGCCAATGCGCACGACGATGCCACCGCGCATTACTCGATGGTCCTGCCGCTGTTCATGGGCGCCAGCCAGGACCAGAGCTACATCATCCGCACCCGTCCGCAGGACAGGCAGGCCGTGCTCAAGGCCGCCGTGGCTGCGCTGAAGCAGGCTGATCCGCAGCGGGTCGTGACCGTGCAGCGTACCTACGACCAGGTGCGCCGCAAGTTCTTCGAGAACGACCGCGCCATGGCCGGCATCCTGGTGGGTGTCATCATCGCGCTGCTGATCATCACAGCGCTCGGCATCACCGGCCTGGCCAGCTTCTGGGTGGCGCAGCGGCGGCGCATGATCGGCATCCGCCGTGCGCTTGGCGCCACCCGGCGCAACGTCCTGCGCTACTTCCAGGCCGAGAATTTCGTGCTGGCCACGCTAGGCATCGCGCTCGGCATGGTGTTGGCCTACGCCATCAACCTGTTCCTGATGCTGCACTACGAGTTGCCGCGGCTGCCGGCGATCTATTTTCCGGTCGGCGCGGTGGCGCTGTGGTTGATTGGACAACTGGCCGTGCTGGGCCCGGCGCTGCGCGCCGCCGCGGTGCCGCCGGTTGTCGCGACGAGGAGCGTGTGA
PROTEIN sequence
Length: 410
MELRPILSTLRRHKITATLLILEIALTCAIVCNAVFLIGQRLQHMDMTTGIDEHALLQIQLAEIAPTPDIYARAREDLAVLRQVPGVQAAALTNQLPLGGSSSNSSIKLDLAQRQPNLSAGTYFGQDLPQTMGARLIAGRYLQADEFVDAGIVLKALATGDTKQLPAVTVITQAMGERLWPGQNPLGKTLYIGPVGVRVVGVLADLARANAHDDATAHYSMVLPLFMGASQDQSYIIRTRPQDRQAVLKAAVAALKQADPQRVVTVQRTYDQVRRKFFENDRAMAGILVGVIIALLIITALGITGLASFWVAQRRRMIGIRRALGATRRNVLRYFQAENFVLATLGIALGMVLAYAINLFLMLHYELPRLPAIYFPVGAVALWLIGQLAVLGPALRAAAVPPVVATRSV*