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scnpilot_solids1_trim150_scaffold_4760_curated_1

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..223)

Top 3 Functional Annotations

Value Algorithm Source
Ribbon-helix-helix harboring protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZPU8_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 74.0
  • Bit_score: 138
  • Evalue 2.90e-30
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:EIM01217.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 74.0
  • Bit_score: 138
  • Evalue 4.00e-30
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 74.0
  • Bit_score: 137
  • Evalue 1.50e-30

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGAGCCAATACCGTCTCAATCTCTTCATCCCGCCCCAGCACGCCCGGCGGCTCGATGAGCTGGCCACCAAGAAAGGCGTCTCGAAGTCGTCCATCGTGGCGGCGGCGCTGGCGTCCTGGCTCTCGCCCGATGCCGGTGATCAGCGCGAGGCCGCGATCGCCAAGCGGCTGGACCGGCTCACGCGCCAGTTCGAGCGCCTGGAACGCGACCAGTCCATCCAG
PROTEIN sequence
Length: 74
MSQYRLNLFIPPQHARRLDELATKKGVSKSSIVAAALASWLSPDAGDQREAAIAKRLDRLTRQFERLERDQSIQ