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scnpilot_solids1_trim150_scaffold_414_curated_5

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 3951..5489

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 513.0
  • Bit_score: 665
  • Evalue 5.10e-188
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13) similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 505.0
  • Bit_score: 661
  • Evalue 2.10e-187
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT12_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 513.0
  • Bit_score: 665
  • Evalue 3.60e-188

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAGCATCGGCCACCTCGACCAGTTGCTGCTTGGCGTTGCCGACCGCGAGCTGGCCGCCAACCCCGGCGCAAACCGTATCGTGATCTCCGGCCTGAGCCTGGATTCGCGCCAGGTGGGCCGTGGCGAGGCCTTCGTGGCCTTGGGCGGCACCCAGGCGCACGGTTTTGCCTATGCTGCCGGCGCGGTGCAGCGCGGCGCGGCGGTGATCTTGGCGGAAACGCCGGCGCCCGGCATTGACGTCGCCGGACCCATCGGCAAATTGCCGGCGACGCTCGATGGCGTGGCAGTGCTGTGGATCGATGGGCTGCGCGCCTACCTGGGCGAGATTGCCGCGCGCTACTACGGGCGGCCTAGCGAGTCCATGCATGTACTCGGGGTGACCGGCACCAACGGCAAGACCTCGTGCGTGCAATTGCTGAGCCAGGCTTTCAGCTTGCTCGGCCTGCCGAACGCCAGCATCGGCACGCTGGGCACCGGCATGGCCGGGCACTTGCGCGACAGCGCGCGCACCACGCCGGACGTGATCAGCGTGCAGGCGCTGCTGGCCGACTTCCGCGACCGCGGCGCCAGCCATGTGGCCATGGAAGTCTCCTCGCATGCGCTGGCCCAGGAGCGCGTGGCCGGCGTGGATTTCGAGCTGGCCGTGTTCACCAACCTGACCCGCGACCATCTGGATTACCACGGCAGCATGCAGGCCTATGGCGCCGCCAAGGCGCGGCTGTTCGCCTGGCCGGGATTGCGCGCGGCGGTGATCAATATCGACGACGCCTTTGGTGCCGGGCTGGCGCAAGGGCTGGCGCCAGGGGTCGAACTGCTGACAGTGAGCCAGCGCGCCGATGCTGGCGCGGCAGTCCATGCCAGCGCTGTCGACACTGCGGGCAATGGGCTGGCCTTCACCCTGCATACGCCGTGGGGCGTGCATGCGGTCAGCAGTGGCCTGCTTGGCCACTTCAACGTCGACAACCTGCTGCTGGTGGCCGCCTGCCTCGGCGCGCTCGGCGTGGACTTCGCGCGCATCGTCGCGGCGCTGGGTGCGCTGCAGCCGGTGCCTGGGCGCATGAGTCGGCTTGGCGGCGAAGGCGGGCAGCCGCTGGTGGTGGTCGACTATGCGCACACTCCCGATGCGCTCGAGCAGGCGCTGGGCGCGCTGCGCGAACATTGCGCCGGCCGGCTGCTGTGCGTGTTTGGCTGCGGCGGCGAGCGCGACGTCGGCAAGCGACCCTTGATGGGTGGCATTGCCGCGCGCCTGGCCGACGTGGCCATCGTCACCGACGACAACCCGCGTGGCGAGGACGGCGACGCCATCGTCGCGCAGATCCTGGCCGGCATGCCCGCCCCGGATCCGCACCTGGTCGAGCGCGACCGGGCCAAAGCCATCGCCCTGGCCCTGGCGCGCGCCGGTGCCGGCGACGTGGTGCTGATTGCCGGCAAAGGCCACGAGACCTACCAGGACGGTGCCACCGGCCGTCATCACTTCAGCGACCTCGAGGTGGCCGCCGCGGTCTTGCGCCGTCGCTTCCCGGAGTTGCAGGCATGA
PROTEIN sequence
Length: 513
MSIGHLDQLLLGVADRELAANPGANRIVISGLSLDSRQVGRGEAFVALGGTQAHGFAYAAGAVQRGAAVILAETPAPGIDVAGPIGKLPATLDGVAVLWIDGLRAYLGEIAARYYGRPSESMHVLGVTGTNGKTSCVQLLSQAFSLLGLPNASIGTLGTGMAGHLRDSARTTPDVISVQALLADFRDRGASHVAMEVSSHALAQERVAGVDFELAVFTNLTRDHLDYHGSMQAYGAAKARLFAWPGLRAAVINIDDAFGAGLAQGLAPGVELLTVSQRADAGAAVHASAVDTAGNGLAFTLHTPWGVHAVSSGLLGHFNVDNLLLVAACLGALGVDFARIVAALGALQPVPGRMSRLGGEGGQPLVVVDYAHTPDALEQALGALREHCAGRLLCVFGCGGERDVGKRPLMGGIAARLADVAIVTDDNPRGEDGDAIVAQILAGMPAPDPHLVERDRAKAIALALARAGAGDVVLIAGKGHETYQDGATGRHHFSDLEVAAAVLRRRFPELQA*