ggKbase home page

scnpilot_solids1_trim150_scaffold_414_curated_36

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(40638..41540)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA ligase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W172_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 296.0
  • Bit_score: 531
  • Evalue 6.20e-148
Putative DNA ligase family protein {ECO:0000313|EMBL:EIL93213.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 296.0
  • Bit_score: 531
  • Evalue 8.70e-148
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 304.0
  • Bit_score: 349
  • Evalue 1.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGTACCGACAAGACCGCCGCCGACCTCGCCATCACCCATCCCGACCGCGTGGTGTATCCGGACGATGGCATCACCAAGCAAGACGTAGCCGACTACTACGCCAGCGTGATGGACTGGTTCCTGCCCGGCGTCGTGGACCGCCCCACCTCGGTGATCCGCTGCCCGGAGGGCACGGCGCAGGCCTGCTTCTTCCAGAAGCACATGATCCCGGGCCTGAAGCACGTCGGCAGCGCCAAGCTCAAGGAGGAATCCGGCGCGCAGGCCACGTACATCTACCCGCGGGATGCCACCTCGGTGCTCGAGCTGGTGCAGTTCGGAACGCTGGAATTCCATCCCTGGGGTGCGACGGTGGCGCAGCCCGACCGCGCCGACCGCGTGGTGTTCGAGCTCGACCCGGGTGGGGATGTGGCCTGGGACCGCGTGCCCGCGGCAGCCCGGATGGTGCGCAAGTTCCTGGCGCAGCTCGGCCTGGAGTCCTTCCTGCGCACCACTGGAGGCAAGGGCCTGCACGTGGTGGTGCCGCTCAATCCCGGCTGCCCTTGGCCACAGGTGAAGGATTTCTCGCGCGCCTTCGCCAGCTCACTGGCGCAAGCGCATCCGCTGGAGTTCATCGCCACCGCCAGCAAGGCCCGGCGCAGCGGCCTGATCTACGTGGATTACCTGCGCAACAGCCGCGGCGCGACCAGCGTGGCGTCCTACTCGCTGCGCTCGCGTCCCGGCGCACCGGTGGCCATGCCATTGCGTTGGAACGAACTGGGCAAGCTCCAGAGTGGCCACGATTTCGACATCCATTCCGCGCCAAAGCGGCTGGCACGGCTGCGCAGCGATCCATGGGCTGGCATCGACGAGCTGCGGCAGGATCTCGATGCGGTCATGAAAAAGATGGCTGACGAGTCCTGA
PROTEIN sequence
Length: 301
MRTDKTAADLAITHPDRVVYPDDGITKQDVADYYASVMDWFLPGVVDRPTSVIRCPEGTAQACFFQKHMIPGLKHVGSAKLKEESGAQATYIYPRDATSVLELVQFGTLEFHPWGATVAQPDRADRVVFELDPGGDVAWDRVPAAARMVRKFLAQLGLESFLRTTGGKGLHVVVPLNPGCPWPQVKDFSRAFASSLAQAHPLEFIATASKARRSGLIYVDYLRNSRGATSVASYSLRSRPGAPVAMPLRWNELGKLQSGHDFDIHSAPKRLARLRSDPWAGIDELRQDLDAVMKKMADES*