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scnpilot_solids1_trim150_scaffold_599_curated

Search features with annotation key words

Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_599_curated_31
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26741..27283)
DNA (543bp) protein (181aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE3_9GAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EIM02385.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
scnpilot_solids1_trim150_scaffold_599_curated_32
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27357..28367)
DNA (1011bp) protein (337aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Arabinose 5-phosphate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U1_9GAMM
KpsF/GutQ family protein
scnpilot_solids1_trim150_scaffold_599_curated_33
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28576..28815
DNA (240bp) protein (80aa)
BolA superfamily transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U2_9GAMM
BolA superfamily transcriptional regulator {ECO:0000313|EMBL:EIL94483.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator, BolA superfamily
scnpilot_solids1_trim150_scaffold_599_curated_34
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28917..30176
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U3_9GAMM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
scnpilot_solids1_trim150_scaffold_599_curated_35
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30443..31150)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94485.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3108)
scnpilot_solids1_trim150_scaffold_599_curated_36
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31185..31823)
DNA (639bp) protein (213aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylformylglycinamidine synthase, clade II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U5_9GAMM
scnpilot_solids1_trim150_scaffold_599_curated_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31856..32929)
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U6_9GAMM
scnpilot_solids1_trim150_scaffold_599_curated_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33096..34079
DNA (984bp) protein (328aa)
Putative secreted protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U7_9GAMM
Putative secreted protein {ECO:0000313|EMBL:EIL94488.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_39
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34084..35259
DNA (1176bp) protein (392aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U8_9GAMM
Putative permease {ECO:0000313|EMBL:EIL94489.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
scnpilot_solids1_trim150_scaffold_599_curated_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35256..35963
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94490.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
regulatory inactivation of DnaA Hda protein
scnpilot_solids1_trim150_scaffold_599_curated_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36583..37386)
DNA (804bp) protein (268aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V0_9GAMM
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIL94491.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
scnpilot_solids1_trim150_scaffold_599_curated_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37500..38258
DNA (759bp) protein (253aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V1_9GAMM
RNA methyltransferase, TrmH family, group 1
scnpilot_solids1_trim150_scaffold_599_curated_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38321..39643)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94493.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
CBS domain-containing protein
scnpilot_solids1_trim150_scaffold_599_curated_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39790..40419
DNA (630bp) protein (210aa)
Pit accessory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V3_9GAMM
Pit accessory protein {ECO:0000313|EMBL:EIL94494.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate transport regulator related to PhoU
scnpilot_solids1_trim150_scaffold_599_curated_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40498..41616
DNA (1119bp) protein (373aa)
Phosphate/sulfate permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V4_9GAMM
Phosphate/sulfate permease {ECO:0000313|EMBL:EIL94495.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate/sulfate permease
scnpilot_solids1_trim150_scaffold_599_curated_46
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41656..42060)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94496.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42127..42468
DNA (342bp) protein (114aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V6_9GAMM
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein {ECO:0000313|EMBL:EIL94497.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative methylated DNA-protein cysteine methyltransferase
scnpilot_solids1_trim150_scaffold_599_curated_48
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42847..44673
DNA (1827bp) protein (609aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V7_9GAMM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIL94498.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent DNA helicase RecQ
scnpilot_solids1_trim150_scaffold_599_curated_49
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44974..45882
DNA (909bp) protein (303aa)
Sugar transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V8_9GAMM
Sugar transporter {ECO:0000313|EMBL:EIL94499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MFS transporter, sugar porter family
Displaying items 31-49 of 49 in total

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