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scnpilot_solids1_trim150_scaffold_117_curated

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_117_curated_31
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33276..34226
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY53_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFN19252.1}; TaxID=645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_32
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34364..35299
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94075.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
restriction endonuclease
scnpilot_solids1_trim150_scaffold_117_curated_33
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35551..36639)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003498222
Peptidase S41 family protein {ECO:0000313|EMBL:KFC75770.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_34
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36872..37537)
DNA (666bp) protein (222aa)
baeR; DNA-binding transcriptional regulator BaeR (EC:2.7.3.-); K07664 two-component system, OmpR family, response regulator BaeR
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003659D23
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein {ECO:0000313|EMBL:KFC72822.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
scnpilot_solids1_trim150_scaffold_117_curated_35
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37534..38934)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348C9D5
scnpilot_solids1_trim150_scaffold_117_curated_36
unknown

Not on your lists

comp(39072..39266)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_117_curated_37
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39688..40440
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI0003670ECF
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AJZ61881.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_117_curated_38
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40596..42122
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C05A9
Deoxyribodipyrimidine photolyase-like protein {ECO:0000313|EMBL:ENO74516.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
deoxyribodipyrimidine photolyase-like protein; K06876 deoxyribodipyrimidine photolyase-related protein
scnpilot_solids1_trim150_scaffold_117_curated_39
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42242..44164)
DNA (1923bp) protein (641aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N7_9GAMM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
molecular chaperone of HSP90 family
scnpilot_solids1_trim150_scaffold_117_curated_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44277..45170)
DNA (894bp) protein (298aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protease HtpX n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N8_9GAMM
Heat shock protein
scnpilot_solids1_trim150_scaffold_117_curated_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45276..46145
DNA (870bp) protein (290aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N9_9GAMM
glutamyl-queuosine tRNA(Asp) synthetase
scnpilot_solids1_trim150_scaffold_117_curated_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46257..46997
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.36 1.1.1.100)
Acetoacetyl-CoA reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P0_9GAMM
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EIL94081.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_117_curated_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47073..47867)
DNA (795bp) protein (265aa)
Dinucleotide-utilizing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P1_9GAMM
Dinucleotide-utilizing protein {ECO:0000313|EMBL:EIL94082.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
scnpilot_solids1_trim150_scaffold_117_curated_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48018..48407
DNA (390bp) protein (130aa)
Cytochrome C n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P2_9GAMM
Cytochrome C {ECO:0000313|EMBL:EIL94083.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c556
scnpilot_solids1_trim150_scaffold_117_curated_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48487..48789)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94084.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_46
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48846..49721)
DNA (876bp) protein (292aa)
Pirin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P4_9GAMM
Pirin {ECO:0000313|EMBL:EIL94085.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Pirin-related protein
scnpilot_solids1_trim150_scaffold_117_curated_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49732..50793)
DNA (1062bp) protein (354aa)
NADPH dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P5_9GAMM
NADPH dehydrogenase {ECO:0000313|EMBL:EIL94086.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids1_trim150_scaffold_117_curated_48
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50846..51760)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94087.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative alpha/beta hydrolase
scnpilot_solids1_trim150_scaffold_117_curated_49
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51845..52054)
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P7_9GAMM
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EIL94088.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cold shock protein
scnpilot_solids1_trim150_scaffold_117_curated_50
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52600..53040
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94089.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_51
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53048..54301)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94090.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_52
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54472..54903
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94091.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_117_curated_53
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55021..56115
DNA (1095bp) protein (365aa)
Phospholipase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q1_9GAMM
Phospholipase {ECO:0000313|EMBL:EIL94092.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane phospholipase A
scnpilot_solids1_trim150_scaffold_117_curated_54
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56183..56665)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q2_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids1_trim150_scaffold_117_curated_55
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56823..57308)
DNA (486bp) protein (162aa)
Glutathione peroxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q3_9GAMM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione peroxidase
scnpilot_solids1_trim150_scaffold_117_curated_56
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57410..58420
DNA (1011bp) protein (337aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q4_9GAMM
ABC-type metal ion transport system, ATPase component
scnpilot_solids1_trim150_scaffold_117_curated_57
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58417..59094
DNA (678bp) protein (226aa)
ABC-type metal ion transport system permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q5_9GAMM
ABC-type metal ion transport system permease {ECO:0000313|EMBL:EIL94096.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type metal ion transport system, permease component
scnpilot_solids1_trim150_scaffold_117_curated_58
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59326..60123
DNA (798bp) protein (266aa)
Lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q6_9GAMM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
scnpilot_solids1_trim150_scaffold_117_curated_59
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60236..61420)
DNA (1185bp) protein (395aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q7_9GAMM
nicotinate phosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_117_curated_60
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61663..62577
DNA (915bp) protein (305aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q8_9GAMM
Cytochrome c, class I {ECO:0000313|EMBL:EIL94099.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c1
Displaying items 31-60 of 111 in total

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