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scnpilot_solids1_trim150_scaffold_289_curated

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_289_curated_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(43212..44396)
DNA (1185bp) protein (395aa)
methylitaconate delta2-delta3-isomerase (EC:5.3.3.6); K09788 hypothetical protein
Methylitaconate delta2-delta3-isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW44_9GAMM
Methylitaconate delta2-delta3-isomerase {ECO:0000313|EMBL:EIL91435.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_289_curated_32
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44502..47096)
DNA (2595bp) protein (865aa)
Aconitate hydratase {ECO:0000313|EMBL:EIL91436.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EIL91436.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW45_9GAMM
scnpilot_solids1_trim150_scaffold_289_curated_33
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47491..48180
DNA (690bp) protein (230aa)
Integral membrane protein, terc family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW46_9GAMM
Integral membrane protein, terc family {ECO:0000313|EMBL:EIL91437.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
integral membrane protein, YjbE family
scnpilot_solids1_trim150_scaffold_289_curated_34
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48284..49429)
DNA (1146bp) protein (382aa)
Citrate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW47_9GAMM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-methylcitrate synthase/citrate synthase II
scnpilot_solids1_trim150_scaffold_289_curated_35
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49482..50366)
DNA (885bp) protein (295aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW48_9GAMM
scnpilot_solids1_trim150_scaffold_289_curated_36
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50529..51842
DNA (1314bp) protein (438aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW49_9GAMM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EIL91440.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Na+/H+ dicarboxylate symporter
scnpilot_solids1_trim150_scaffold_289_curated_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52014..52577
DNA (564bp) protein (188aa)
Peroxiredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW50_9GAMM
Peroxiredoxin {ECO:0000313|EMBL:EIL91441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peroxiredoxin
scnpilot_solids1_trim150_scaffold_289_curated_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52758..54356
DNA (1599bp) protein (533aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW51_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL91442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids1_trim150_scaffold_289_curated_39
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54420..56315)
DNA (1896bp) protein (632aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:EIL91443.1}; EC=6.2.1.17 {ECO:0000313|EMBL:EIL91443.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
propionyl-CoA synthetase (EC:6.2.1.17)
Propionyl-CoA synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW52_9GAMM
scnpilot_solids1_trim150_scaffold_289_curated_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56475..57503
DNA (1029bp) protein (343aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW53_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL91444.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator, MerR family/albicidin resistance protein
scnpilot_solids1_trim150_scaffold_289_curated_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57571..58554)
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW54_9GAMM
malate dehydrogenase
scnpilot_solids1_trim150_scaffold_289_curated_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58645..59844)
DNA (1200bp) protein (400aa)
Class I and II aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW55_9GAMM
Class I and II aminotransferase {ECO:0000313|EMBL:EIL91446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids1_trim150_scaffold_289_curated_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59996..60250
DNA (255bp) protein (85aa)
Transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW56_9GAMM
Transglycosylase {ECO:0000313|EMBL:EIL91447.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_289_curated_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60348..60785)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_289_curated_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60921..61430)
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW58_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids1_trim150_scaffold_289_curated_46
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61538..63286)
DNA (1749bp) protein (583aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW59_9GAMM
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL91450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3HB-oligomer hydrolase (3HBOH)
scnpilot_solids1_trim150_scaffold_289_curated_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63494..64153
DNA (660bp) protein (220aa)
Two component LuxR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW60_9GAMM
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIL91451.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Displaying items 31-47 of 47 in total

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