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scnpilot_solids1_trim150_scaffold_1447_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1447_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..769
DNA (768bp) protein (256aa)
ATP-dependent chaperone ClpB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL7_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent chaperone ClpB
scnpilot_solids1_trim150_scaffold_1447_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(879..1610)
DNA (732bp) protein (244aa)
Curli production assembly/transport component CsgG subfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL8_9GAMM
Curli production assembly/transport component CsgG subfamily protein {ECO:0000313|EMBL:EIL92309.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in formation of curli polymers
scnpilot_solids1_trim150_scaffold_1447_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2100..4583)
DNA (2484bp) protein (828aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL9_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL92310.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_1447_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4861..5187
DNA (327bp) protein (109aa)
FmdB family regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM0_9GAMM
FmdB family regulatory protein {ECO:0000313|EMBL:EIL92311.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FmdB family regulatory protein
scnpilot_solids1_trim150_scaffold_1447_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5293..5856
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92312.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3011)
scnpilot_solids1_trim150_scaffold_1447_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5977..7731
DNA (1755bp) protein (585aa)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EIL92313.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EIL92313.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Aspartate--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM2_9GAMM
aspartyl-tRNA synthetase
scnpilot_solids1_trim150_scaffold_1447_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7821..8468
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92314.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysophospholipase
scnpilot_solids1_trim150_scaffold_1447_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8553..9275
DNA (723bp) protein (241aa)
Probable transcriptional regulatory protein UU7_11447 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM4_9GAMM
Probable transcriptional regulatory protein UU7_11447 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding regulatory protein, YebC/PmpR family
scnpilot_solids1_trim150_scaffold_1447_curated_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9358..9945
DNA (588bp) protein (196aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VY15_9GAMM
scnpilot_solids1_trim150_scaffold_1447_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..10538
DNA (597bp) protein (199aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM6_9GAMM
Holliday junction DNA helicase subunit RuvA
scnpilot_solids1_trim150_scaffold_1447_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10588..12519
DNA (1932bp) protein (644aa)
Probable potassium transport system protein kup n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM7_9GAMM
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
K+ transporter
scnpilot_solids1_trim150_scaffold_1447_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12723..13055
DNA (333bp) protein (111aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYM8_9GAMM
Holliday junction DNA helicase subunit RuvB
Displaying 12 items

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