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scnpilot_solids1_trim150_scaffold_336_curated

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_336_curated_31
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27518..27853)
DNA (336bp) protein (112aa)
TrpR-related protein YerC/YecD n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG7_9GAMM
TrpR-related protein YerC/YecD
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_336_curated_32
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28041..28202)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W686_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94977.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SSU ribosomal protein S31P
scnpilot_solids1_trim150_scaffold_336_curated_33
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28269..29264)
DNA (996bp) protein (332aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W685_9GAMM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIL94976.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation diffusion facilitator family transporter
scnpilot_solids1_trim150_scaffold_336_curated_34
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29317..29787)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W684_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94975.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MerC mercury resistance protein
scnpilot_solids1_trim150_scaffold_336_curated_35
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29846..30331)
DNA (486bp) protein (162aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W683_9GAMM
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIL94974.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe2+/Zn2+ uptake regulation protein
scnpilot_solids1_trim150_scaffold_336_curated_36
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30360..30662)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W682_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94973.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_336_curated_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30696..32096)
DNA (1401bp) protein (467aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W681_9GAMM
scnpilot_solids1_trim150_scaffold_336_curated_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32163..32597)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W680_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94971.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_336_curated_39
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32657..33871
DNA (1215bp) protein (405aa)
Glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W679_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL94970.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_336_curated_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33840..34403
DNA (564bp) protein (188aa)
Lipid phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W678_9GAMM
Lipid phosphatase {ECO:0000313|EMBL:EIL94969.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
scnpilot_solids1_trim150_scaffold_336_curated_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34861..35730)
DNA (870bp) protein (290aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W677_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
scnpilot_solids1_trim150_scaffold_336_curated_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35777..36577)
DNA (801bp) protein (267aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W676_9GAMM
scnpilot_solids1_trim150_scaffold_336_curated_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36574..37785)
DNA (1212bp) protein (404aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W675_9GAMM
scnpilot_solids1_trim150_scaffold_336_curated_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37912..38805
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W674_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94965.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_336_curated_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38820..39824)
DNA (1005bp) protein (335aa)
Pass1-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W673_9GAMM
Pass1-like protein {ECO:0000313|EMBL:EIL94964.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_336_curated_46
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39830..40453)
DNA (624bp) protein (208aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W672_9GAMM
scnpilot_solids1_trim150_scaffold_336_curated_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40450..41220)
DNA (771bp) protein (257aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W671_9GAMM
pseudouridylate synthase I
scnpilot_solids1_trim150_scaffold_336_curated_48
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41322..43667)
DNA (2346bp) protein (782aa)
FimV N-terminal domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W670_9GAMM
FimV N-terminal domain-containing protein {ECO:0000313|EMBL:EIL94961.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FimV N-terminal domain protein
scnpilot_solids1_trim150_scaffold_336_curated_49
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43839..44147)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W669_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94960.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_336_curated_50
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44149..45180)
DNA (1032bp) protein (344aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W668_9GAMM
scnpilot_solids1_trim150_scaffold_336_curated_51
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45218..46207)
DNA (990bp) protein (330aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W667_9GAMM
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIL94958.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lactate dehydrogenase-like oxidoreductase
scnpilot_solids1_trim150_scaffold_336_curated_52
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46237..47178)
DNA (942bp) protein (314aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W666_9GAMM
Displaying items 31-52 of 52 in total

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