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scnpilot_solids1_trim150_scaffold_639_curated_8

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 6500..7510

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 320.0
  • Bit_score: 635
  • Evalue 4.80e-179
tRNA pseudouridine synthase D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW99_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 320.0
  • Bit_score: 635
  • Evalue 3.40e-179
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 336.0
  • Bit_score: 586
  • Evalue 7.50e-165

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGTCTGAACTTCCCCAAGCCTTCGGCCACCCTCCGCTGACTGCCCGGATGCGCGTCAGCGCCGAGGATTTCCAGGTCGAGGAAGTGCTGGGCCATGACGCCGACGGCGCCGGCGAGCACGCCCTGCTGTGGGTGGAAAAGCGCGGCGCGAATACCGACTGGGTCGCCCGCGAACTGGCGAAGTACGCCGGGGTGCCTCCGCTGGCGGTGGGCTTTGCCGGCATGAAGGATCGCCACGCGGTGACCCGCCAGACCTTTTCGGTGCAACTGGCCGGCAAGCCCGATCCGGACTGGTCGGCATTTCCCCACGCCGAGGTAAAGGTGCTGGCCGCCACCCGCCATTCGCGCAAGCTCAAGCGCGGTGCGCTGCGCGGCAACCGCTTCGTGCTGGTGTTGCGCGAAGCCGCGGGCGACCGCGCCGCGACCGAGGCGGTGCTTGCGCAGGTCGCTGCCCGGGGCGTGCCGAACTACTTCGGCGAACAGCGCTTCGGCCGGGAAGGCGGCAACGTCGCCCAAGCCCGCGCGATGTTCGGCGGGCGCCGCGTCGACCGCGACAAGCGCTCGATGCTGCTGTCGGCGGCCCGCTCGCACATCTTCAACAACGTGCTGGCGGCGCGGGTCGAGCGCAACGCGTGGGATACGCCGCTGCAGGGCGAGATCTGGTCGCTGGCCGGCTCGCGTTCCTGGTTCGGGCCCGAGCCGTTCACGCCCGAGCTGGCCGAGCGCCTGGCCCGCGCCGACATCCATCCCTCCGGCCCGTTGTGGGGGCAGGGCGAGCCGCCCTCCGAAGATGAAGTGGGTGAGCTGGAACGCCAGTTCGCCGCGCAGGACAGTGACCTCGTGGCGGGCCTGGTGGCTGCGCGGATGGACCAGGAGCGCCGGCCGTTGCGTCTGCTGCCGAAGGACTTGCGCTGGCACTGGCTTGCCGACGATGCGCTGGAGCTGTCGTTCGAATTGCCTGCGGGCGCTTATGCCACCGTCGTCGTGCGCGAGCTGGCCACGATCGTGTAG
PROTEIN sequence
Length: 337
MSELPQAFGHPPLTARMRVSAEDFQVEEVLGHDADGAGEHALLWVEKRGANTDWVARELAKYAGVPPLAVGFAGMKDRHAVTRQTFSVQLAGKPDPDWSAFPHAEVKVLAATRHSRKLKRGALRGNRFVLVLREAAGDRAATEAVLAQVAARGVPNYFGEQRFGREGGNVAQARAMFGGRRVDRDKRSMLLSAARSHIFNNVLAARVERNAWDTPLQGEIWSLAGSRSWFGPEPFTPELAERLARADIHPSGPLWGQGEPPSEDEVGELERQFAAQDSDLVAGLVAARMDQERRPLRLLPKDLRWHWLADDALELSFELPAGAYATVVVRELATIV*