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scnpilot_solids1_trim150_scaffold_170_curated_24

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 20556..21815

Top 3 Functional Annotations

Value Algorithm Source
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 419.0
  • Bit_score: 791
  • Evalue 3.60e-226
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90150.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 419.0
  • Bit_score: 791
  • Evalue 5.00e-226
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 419.0
  • Bit_score: 645
  • Evalue 9.90e-183

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACCATGCATCCCATCCTCGCGGCATTGCGCAAGCACAAGGCCGGCGTGGTGCTGATCGCGCTGCAGATCGCGCTGACCCTGGCGATCGTCTGCAACGCGGTGTTCATCATCGGCCAGCGCATCGAACGGGTGAACCGGCTGACCGGCCTGGACGAGAGCGACCTGATGCTGGTCAGCCAGCAATGGGTGGGCGCGCCCAGCGGCGACGATGCCGCCAGCGTGGAAAAACTCGACAGCCTGCAGCTGACCGACCTCGCTGCCCTGCGCGCGCTGCCGGGCGTGGCCTCGGTGGCGCCGGTCAACTCGGTGCCGCTGCTCAACTCGTCGTGGAACGGCGCCGTCGACCACAAGCCCGGGGACACCAACGAGGGCAGCTTCCACGGCACCCGCACCACGTACTACTTCAGCGACGACCAGGCGCTCTCCACCCTGGGCCTGCGCCTGGTGGCGGGGCGCAACTTCACCGCCGCCGACGTGGGCCACCAGGGCTTCCGCGACAACAGCGAACCGTCGGTGGTGATCCTGACCAGCGCGCTGGCCGACAAGCTGTTCCCGCAGGGCGACGCGCTGGGCAAGGTGATCTATCTCAACGGGTCGACCAAACCCACCACCATCATCGGCATGGTGGAGCGCATGCAGGTGCCCGGCACCGGCACCTGGACCAACAGCTTCGCGTGGAACTCGACGCTGGTGCCGATCCGGTTGGACGCGAACTTCGCGCGCTACGCGATACGCGCCAGGCCGGGCCAGCTGGATGCGGTGATGCGTTCGGTGGTCCCGGCGCTGTACAAGGCCAATCCCATGCGCGTGCTGGATGACGACAGCGTGCGCTCGTTCGCCCAGATCCGCGAAAAGGCTTACCAGGCCGATCGCGGCATGGCGATCCTGATGGGCGTGGTCGCGCTGATCCTGCTGTGCGTCACCGCCGCCGGCATCGTCGGCCTCACCAGCTTCTGGGTGGGCCAGCGTCATCGGCAGATCGGCGTACGGCGTGCGCTGGGCGCCCGCAAGATCGACATCCTGCACTACTTCCAGATCGAGAACCTGCTGATCGCGGGCACCGGCGTGGTGATCGGCGTGCTGCTGGCGCTGAGTCTGAACATGTGGCTGATGAGCCACTACGAGATGACCCGCATCCCCGTGCTGTATGTGCTGACCGGCGTGCTGGCGATGCTGGCGATCGGCCAAGCCGCCGTGTTCGTGCCGGCCCGGCGCGCGTCCAACGTACCGCCGGTGGTGGCGACGCGGGCGGTGTGA
PROTEIN sequence
Length: 420
MTMHPILAALRKHKAGVVLIALQIALTLAIVCNAVFIIGQRIERVNRLTGLDESDLMLVSQQWVGAPSGDDAASVEKLDSLQLTDLAALRALPGVASVAPVNSVPLLNSSWNGAVDHKPGDTNEGSFHGTRTTYYFSDDQALSTLGLRLVAGRNFTAADVGHQGFRDNSEPSVVILTSALADKLFPQGDALGKVIYLNGSTKPTTIIGMVERMQVPGTGTWTNSFAWNSTLVPIRLDANFARYAIRARPGQLDAVMRSVVPALYKANPMRVLDDDSVRSFAQIREKAYQADRGMAILMGVVALILLCVTAAGIVGLTSFWVGQRHRQIGVRRALGARKIDILHYFQIENLLIAGTGVVIGVLLALSLNMWLMSHYEMTRIPVLYVLTGVLAMLAIGQAAVFVPARRASNVPPVVATRAV*